DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and smad7

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_004910394.1 Gene:smad7 / 100486892 XenbaseID:XB-GENE-486004 Length:383 Species:Xenopus tropicalis


Alignment Length:409 Identity:122/409 - (29%)
Similarity:182/409 - (44%) Gaps:86/409 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 CCGGATESTSGSTL-TIPVSTSRATAHPPQTQAQNGKRFREDFEALMKQLKRKQRNELLLAVKSR 243
            |.|.:.....|..| ....:..:|.||                 :::|:||.||...||.||:.:
 Frog    38 CLGKSANKVPGKALGGSEAAELKALAH-----------------SVLKKLKEKQLEGLLQAVECK 85

  Fly   244 LDPPTKTQRDVVEPTTTTAPTYLQCILIPCKT------QTVWEPHVTASRLFFWRELWNAKELKR 302
                          ....:|    |:|:|...      |..:...:...::|.|.:|.::.|:||
 Frog    86 --------------GGARSP----CLLLPAAKLDSRLGQQPFSLPLLLCKVFRWPDLRHSSEVKR 132

  Fly   303 LPTCPA--ARDCIYMCCNPLHWFRILHQPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAALS 365
            |..|.:  ..:...:||||.|..|:.   |.|||.|||.|..|      ||.:.:.:...|...|
 Frog   133 LSCCDSYGKNNPELVCCNPHHLSRLC---ELESPPPPYTRYPM------DFLKPTADSPDSVPSS 188

  Fly   366 TWSAESTSISNIYKPALYESVTTDGK--------DHNINSQVWCQIAYWEMAHRVGEFFHAKTNA 422
            |    .|..:|...|   |.::.|.:        .|      ||.:||||...|||..:..:..:
 Frog   189 T----ETGGTNFLAP---EGLSADSQLLHETGDPSH------WCVVAYWEEKTRVGRLYSVQEPS 240

  Fly   423 VNIYTDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVD 487
            ::|:.|   ..:.:..||..|.  .:....:|.|.|..:|.|:.|:.|...||:|||.:..||:.
 Frog   241 LDIFYD---LPQGNGFCLGQLN--SDNKSQLVQKVRSKIGYGIQLTKEVDGVWVYNRSSYPIFIK 300

  Fly   488 SPTLSENLDR----VCKVMPGYCLKAFETNRAELLSMRDHGHHPM-GPVDYFSIKISFGKGWGRD 547
            |.|| :|.|.    |.||.||:.:|||:..:|..| .|.:.|..| .|...|:::|||.||||:.
 Frog   301 SATL-DNPDSRTLLVHKVFPGFSIKAFDYEKAYSL-QRPNDHEFMQQPWTGFTVQISFVKGWGQC 363

  Fly   548 YKRQDIMGCPCWLEVHFSH 566
            |.||.|..|||||||.|::
 Frog   364 YTRQFISSCPCWLEVIFNN 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 31/139 (22%)
MH2_I-SMAD 400..565 CDD:199821 66/169 (39%)
smad7XP_004910394.1 MH1_SMAD_7 36..163 CDD:199818 37/162 (23%)
MH2_SMAD_7 211..381 CDD:199825 67/182 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5637
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D193735at33208
OrthoFinder 1 1.000 - - FOG0003707
OrthoInspector 1 1.000 - - otm47666
Panther 1 1.100 - - O PTHR13703
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5077
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.050

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