Protein Alignment Patr-1 and Patl2

DIOPT Version :10

• Sequence 1: NP_650592.1
• Gene: Patr-1 / 42058
• FlyBaseID: FBgn0266053
• Length: 968
• Species: Drosophila melanogaster
• Sequence 2: XP_063141051.1
• Gene: Patl2 / 366176
• RGDID: 1307887
• Length: 447
• Species: Rattus norvegicus
• Alignment Length: 544
• Identity: 123/544 - (22%)
• Similarity: 217/544 - (39%)
• Gaps: 160/544 - (29%)

  Fly   390 MRAAGIH---PGAFMQPPHPHQMLPPRMP-PHPLQAATSLLGQQPPNSMYNMFNMRLVQEIQQNH 450
            |..|.:|   ...|.:...|.....|:.| |.|....:.|....|        .:||...:.|.|
  Rat     1 MSPASLHFLCQSVFPRTSSPAHHFGPQQPSPDPFLFCSPLTPWPP--------KLRLPSHLTQLH 57

  Fly   451 PLLQQAAVVRQMQQSRAGSVASDRQRSQAQQQQQGRRPDGTGNYPLEEYDEYANLMSTRDKHWLI 515
            |  |...:::|.||          |.||..::..|::|..      .|.|.|||||:.::|.|:|
  Rat    58 P--QHQKILQQQQQ----------QWSQTARRVPGQKPRS------RESDAYANLMTRKEKDWVI 104

  Fly   516 GIQLSQLNTDTPYIDDYYYTVF----RERKAQQN--GQMRNSQAHKDNQLNHPLTQPRGHAQLIL 574
            .:|:.||.::.|.:|||||..:    .:|:|.|.  ||...:|:.|   |..|..|
  Rat   105 RVQMVQLQSENPRLDDYYYQKYYQKLEKRQADQELLGQRNRAQSLK---LVTPYIQ--------- 157

  Fly   575 VQLGNKNGTRNGHGRERRNSENTNSTSGNTNNGSGGNNNNLTGYIFSPLKFENSLGKLQYGSVTA 639
                              .||...|.                      ::.|.|||::...:..:
  Rat   158 ------------------KSEVYESV----------------------VRIEGSLGQVAVSTCFS 182

  Fly   640 PRKIIDADIMSGESNAAAEANATSSSKSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLLKL 704
            ||:.||| :..|                      :...|...:|.::.| :|..||.::..|||:
  Rat   183 PRRAIDA-VSHG----------------------TQEQDTGAASSQRLR-VLSQIEKMFLQLLKI 223

  Fly   705 EDLESPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQTMNPQLKNKFNYEVETKA 769
            |:.::..:.....|:     |:...:|:|..|.||.|:...|.
  Rat   224 EEGQNDGLPQHYHLR-----EQSNQVEKLFQALKTQEQNNLEE---------------------- 261

  Fly   770 ALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMPF-IADQSIRWVVWSGVFCSLQTVVKKDKDDVE 833
                      |.|.::.:::||||||.:.|::|| :.||::..:::  :...|..::::|..|..
  Rat   262 ----------AADNLLQVLSVRKGKIFVARLLPFLLQDQAVSLLLY--ITYHLPLLIQRDMADQS 314

  Fly   834 GVLYALYPEFKKHVNKATF-ELLVSISSAITL----NDKKLAGIFCSRFGILSLVALILRAEEIY 893
              |..|:...:|::...|| :||.::...:.|    :::.::.:..::|||..|.||:...|::
  Rat   315 --LQMLFKPLRKYIRHLTFPQLLHALQGLMLLSPDSSERPVSVVLQNQFGISLLYALLSHGEQL- 376

  Fly   894 VSRTDATLSEENRQKWREFLAQVA 917
            ||...:..|..:...|.:.:..||
  Rat   377 VSLDSSLQSSSDCVAWTDLVILVA 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Patr-1	NP_650592.1	PAT1	<292..>589	CDD:401645	54/208 (26%)
Patl2	XP_063141051.1	None