DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Patr-1 and SPBC19G7.10c

DIOPT Version :9

Sequence 1:NP_001287369.1 Gene:Patr-1 / 42058 FlyBaseID:FBgn0266053 Length:968 Species:Drosophila melanogaster
Sequence 2:NP_595976.2 Gene:SPBC19G7.10c / 2540778 PomBaseID:SPBC19G7.10c Length:754 Species:Schizosaccharomyces pombe


Alignment Length:973 Identity:185/973 - (19%)
Similarity:309/973 - (31%) Gaps:385/973 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFFGFDTNLP-----------DEDGGD--------GRIVEAEYDALNDETFGSAINGDWEEAHET 49
            |||||:|.||           :|||.|        |..:....|.|||||||             
pombe     2 SFFGFNTTLPKENMFPNEGQLEEDGIDFEETYDDLGNQLNEAGDELNDETFG------------- 53

  Fly    50 MVRLGGNGERVRKRPAESSGNTDFADQGNGAFLRHANPLSSAPSSSGSTPAPLNAPFRQSRHIGD 114
             |..|..|.           :.||                     ||:|.       :.|..:.|
pombe    54 -VSAGSIGR-----------DFDF---------------------SGTTA-------QASAQLED 78

  Fly   115 SDLELNISSMKLDDMDLSSFTTDSEAGGLSNRIKLDSGVWGSQPFPNNQHLFREPMRSA------ 173
            ...::|..::....:..:|    ||...:|   :|:    |:..||:     |||..:|      
pombe    79 EQYQINQQNIFAKPVKPAS----SELPQVS---RLN----GASQFPS-----REPASTAINKLSD 127

  Fly   174 FKPQQQQHQQHQPQQ--MKPPQEANANFALNPQPFPKITTLEDIERNMIIQQAIPKQQQQSQQQA 236
            .:|.....:...|::  :.||:.|:....|..||..|:.:|:::|..::.....||...|     
pombe   128 LQPMASIWENIVPEKPAIIPPEVASLQDRLGAQPSEKVFSLQELEEQLLNSMTAPKPPSQ----- 187

  Fly   237 ERKMFDDFSLGNRQQVPTPTMLQQQMLQQQHHQKQQSQQQPPQQAQHKVPPGFLGTPHTSPPRPN 301
                            |...::..:|..|...:...|.......|.       :|         |
pombe   188 ----------------PAIPIVPSEMAAQVTRENISSLDPAISAAS-------IG---------N 220

  Fly   302 LGFPGPELLPTPSSQQQLNGIGGNRVPPGFIYP-QGLPGNIPQLPQHPLMQQHMPHNFPLPGGNQ 365
            :.|..|.:   ||:.....|:..    |..::| |.:|        :|:||..:....|.|   |
pombe   221 VTFGQPNI---PSTTTDFAGLAA----PNMVHPSQAIP--------NPVMQPSLVPQMPYP---Q 267

  Fly   366 RPLPNPQALPTALNNFAMHPSFNAMRAAGIHPGAFMQPPHPHQMLPPRMPPHPLQAATSLLGQQP 430
            ..:.||..                                                       .|
pombe   268 NGMYNPSV-------------------------------------------------------AP 277

  Fly   431 PNSMYNMFNMRLV----------QEIQQNHPLLQQAAVVRQMQQSRAGSVASDRQRSQAQQQQQG 485
            |.|:.|:|....:          |:::::|.|:.|.                             
pombe   278 PASLVNLFQQEQLIQNQNLDEKRQKLERDHMLMAQC----------------------------- 313

  Fly   486 RRPDGTGNYPLEEYDEYANLMSTRDKHWLIGIQLSQLNTDTPYIDDYYYTVF---RERKAQQNGQ 547
                             |.||:..||.::..||:|||.::.|..||:||.|:   |.||      
pombe   314 -----------------AGLMTRSDKSFIARIQISQLMSEDPESDDFYYRVYSIIRGRK------ 355

  Fly   548 MRNSQAHKDNQLNHPLTQPRGHAQLILVQLGNKNGTRNGHGRERRNSENTNSTSGNTNNGSGGNN 612
                          |..:...|  .|...||..|..|.|     |.|||.....          .
pombe   356 --------------PSEEEASH--FIQTYLGPSNNRRRG-----RRSENPMQKL----------Q 389

  Fly   613 NNLTGYIFS--------PLKFENSLGKLQYGSVTAPRKIIDADIMSGESNAAAEANATSSSKSST 669
            ..|...:.|        .|..|.:|||:...:|..||:::         |........||:.|..
pombe   390 QQLQRLVSSAKERPKATQLSLEGALGKIAVNTVRTPRQLL---------NVKRPTEPASSNSSLN 445

  Fly   670 PLPTSASHDVNPSSMRKSRHILLLIETLYRYLLKLEDLESPEVMATIELKKKKEAE--RIAALEQ 732
                      |.|.....:.:|..||.:|..||..|  ::....:|:|...:::.:  :....|:
pombe   446 ----------NFSGFSTKKDVLHAIEKVYDLLLDFE--QALRKASTLETTDQEQIDTWKTTLSEK 498

  Fly   733 LEMANKTPEERAAEAANPQTMNPQLKNKFNYEVETKAALVNKLKAGLAFDKVIAMMNVRKGKILI 797
            ||...|......:..|:.:|..|                            .|::::..||..|:
pombe   499 LESIWKALYINESLEASSKTRPP----------------------------FISIISHPKGMRLL 535

  Fly   798 RRIMPFIADQS----IRWVVWSGVFCSLQTVVKKDKDDVEGVL------------YALYPEFKKH 846
            .|:.|.::.:.    ::.||::  |.||. :|.:...||.|.|            ..:.|.....
pombe   536 PRLFPHLSKEQQISILKVVVYN--FDSLD-IVLRGTFDVNGELPLDVVSEMSSFTQFIIPPLLTI 597

  Fly   847 VNKATFELLVSISSAITLNDKKLAGIFCSRFGILSLVALILRAEEIYVSRTDATLSEENRQKW 909
            ||:...|.:.::.|.: ||......:..::.|:..|...|.|||   :.:...|:::..:::|
pombe   598 VNELDLETINNLFSQL-LNRTNAVYLIQTKIGLSFLTLFISRAE---ILKQSGTVNQNEKEEW 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Patr-1NP_001287369.1 PAT1 <334..>589 CDD:286811 47/268 (18%)
SPBC19G7.10cNP_595976.2 PAT1 1..750 CDD:286811 185/973 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4592
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 107 1.000 Inparanoid score I1597
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002413
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21551
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R889
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.950

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