Sequence 1: | NP_001287369.1 | Gene: | Patr-1 / 42058 | FlyBaseID: | FBgn0266053 | Length: | 968 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_689929.2 | Gene: | PATL1 / 219988 | HGNCID: | 26721 | Length: | 770 | Species: | Homo sapiens |
Alignment Length: | 1023 | Identity: | 244/1023 - (23%) |
---|---|---|---|
Similarity: | 382/1023 - (37%) | Gaps: | 328/1023 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DDSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGS-AINGDWEEAHETMVRL-----------G 54
Fly 55 GNGERVRKRPAESSGNTDFAD-QGNGAFLRHANPLSSAPSSSGSTPAPLNAPFRQSRHIGDSDLE 118
Fly 119 LNISSMKLDDMDLSSFTT----DSEAGGLSNRIKLDSGVW-GSQPFPNNQHLFREPMRSAFKPQQ 178
Fly 179 QQHQQHQPQQMKPPQEANANFALNPQPFPKITTLEDIERNMIIQQAIPKQQQQSQQQAERKMFDD 243
Fly 244 FSLGN-RQQVPTPTMLQQQMLQQQHHQKQQSQQQPPQQAQHKVPPGFLGTPHTSPPRPN---LGF 304
Fly 305 PGPELLP---TPSSQQQLNGIGGNRVPPGFIYPQ---GLPGNIPQLPQHPLMQQHMPHNFPLPGG 363
Fly 364 NQRPLPN--PQALPTALNNFAMHPSFNAMRAAGIHPGAFMQPPHPHQMLPPRMPPHPLQAATSLL 426
Fly 427 GQQPPNSMYNMFNMRLVQEIQQNHPLLQQAAVVRQMQ---QSRAGSVASDRQRSQAQQQQQGRRP 488
Fly 489 DGTGNYPLEEYDEYANLMSTRDKHWLIGIQLSQLNTDTPYIDDYYYTVFRERKAQQNGQMRNSQA 553
Fly 554 HKDNQLNHPLTQPRGHAQLILVQLGNKNGTRNGHGRERRNSENTNSTSGNTNNGSGGNNNNLTGY 618
Fly 619 IFSPLKFENSLGKLQYGSVTAPRKIIDADIMSGESNAAAEANATSSSKSSTPLPTSASHDVNPSS 683
Fly 684 MR---KSRHILLLIETLYRYLLKLEDLESPEVMATIELKKKKEAERIAALEQLE---------MA 736
Fly 737 NKTP-EERAAEAANPQTMNPQLKNKFNYEVETKAALVNKLKAGLAFDKVIAMMNVRKGKILIRRI 800
Fly 801 MPFIADQSIRWVVWSGVFCSLQTVVKKD-KDDVEGVLYALYPEFKKHVNKATF-----ELLVSIS 859
Fly 860 SAIT--LNDKKLAGIFCSRFGILSLVALILRAEEIYVSRTDATLSEENRQKWREFLAQVASCLNR 922
Fly 923 TIQNQTISAAIESDAIQP--LMDHFERFKDLK----LDALLALITEAR 964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Patr-1 | NP_001287369.1 | PAT1 | <334..>589 | CDD:286811 | 70/262 (27%) |
PATL1 | NP_689929.2 | Involved in nuclear foci localization | 1..397 | 126/516 (24%) | |
Region A, interaction with DDX6/RCK | 1..84 | 31/96 (32%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..26 | 4/13 (31%) | |||
Region N, interaction with decapping machinery | 85..388 | 94/409 (23%) | |||
Nuclear export signal | 86..95 | 3/24 (13%) | |||
Involved in RNA-binding | 223..397 | 60/217 (28%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 314..344 | 13/39 (33%) | |||
PAT1 | <341..>613 | CDD:286811 | 95/408 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 360..399 | 14/54 (26%) | |||
Region H | 389..448 | 23/77 (30%) | |||
Involved in nuclear spleckles localization | 398..770 | 116/503 (23%) | |||
Region C | 449..770 | 95/433 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165147678 | |
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I8953 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4592 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 112 | 1.000 | Inparanoid score | I4862 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D404416at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002413 | |
OrthoInspector | 1 | 1.000 | - | - | oto89097 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108520 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21551 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R889 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.790 |