DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-32 and rlmE

DIOPT Version :10

Sequence 1:NP_650590.1 Gene:Trm7-32 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_417646.1 Gene:rlmE / 947689 ECOCYCID:EG11507 Length:209 Species:Escherichia coli


Alignment Length:196 Identity:65/196 - (33%)
Similarity:102/196 - (52%) Gaps:10/196 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYDTCETDDEKS 74
            |.|.:||:.:|.|:|:.|||..:.::..:.......|||.||||.|||.:..::         ..
E. coli    20 DKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQI---------GG 75

  Fly    75 AVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMDEYM 139
            ..:|||.||..|.||.|:..||||...:...:|::... |:.|.|:|:.|.||:::|...:|...
E. coli    76 KGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV-GDSKVQVVMSDMAPNMSGTPAVDIPR 139

  Fly   140 QHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPSSIEAFVVC 204
            ...|:..||.:...||..||:||.|:|:|........:::..|.|..:.||.|||..|.|.::|.
E. coli   140 AMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVA 204

  Fly   205 S 205
            :
E. coli   205 T 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-32NP_650590.1 RlmE 1..207 CDD:440062 65/196 (33%)
rlmENP_417646.1 rrmJ 1..208 CDD:183025 65/196 (33%)

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