DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5220 and TRM7

DIOPT Version :9

Sequence 1:NP_650590.1 Gene:CG5220 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_009617.3 Gene:TRM7 / 852353 SGDID:S000000265 Length:310 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:134/296 - (45%)
Similarity:188/296 - (63%) Gaps:26/296 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILN--GVQRAVDLCAAPGSWSQVLSRKL 63
            |||:||||||:|||:||::|:|||||||||.:::.:..|:  .::|.||||||||||||||||||
Yeast     1 MGKSSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKL 65

  Fly    64 YDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPD 128
            :|...:.|::.. ||::||||.|:||..:..||.|||...|...|:..| |||||..|..|||||
Yeast    66 FDESPSSDKEDR-KIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLF-GNEKADFVCSDGAPD 128

  Fly   129 VTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSS 193
            |||:|::|||:|.||:::||.:..|:|:.|||||||||:|....:|.||:...|.|....||.||
Yeast   129 VTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSS 193

  Fly   194 RPSSIEAFVVCSDFCLPEGYIPQV-INPARDDI--------RLLAQKTG--SEVNRRLVPFIACG 247
            |.:|:|||:||..:..|..:.|:: :|.:.|:.        ..::.|..  :|..|.:..|:|||
Yeast   194 RGTSLEAFIVCLGYNPPSNWTPKLDVNTSVDEFFQGCFLNKLCISDKLSHWNEEERNIAEFMACG 258

  Fly   248 DL---------NGLSDPEEGKTSSSD--ESKSNLEY 272
            .|         :.|.....|.:||.|  :|.:|..|
Yeast   259 SLQSFDSDATYHDLPSSVAGTSSSLDPVQSPTNPPY 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5220NP_650590.1 RlmE 3..211 CDD:223370 112/209 (54%)
TRM7NP_009617.3 RlmE 1..211 CDD:223370 114/211 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344497
Domainoid 1 1.000 190 1.000 Domainoid score I637
eggNOG 1 0.900 - - E1_COG0293
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5372
Inparanoid 1 1.050 233 1.000 Inparanoid score I717
Isobase 1 0.950 - 0 Normalized mean entropy S638
OMA 1 1.010 - - QHG54241
OrthoFinder 1 1.000 - - FOG0004400
OrthoInspector 1 1.000 - - otm46558
orthoMCL 1 0.900 - - OOG6_102125
Panther 1 1.100 - - LDO PTHR10920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1803
SonicParanoid 1 1.000 - - X3115
TreeFam 00.000 Not matched by this tool.
1514.780

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