DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-32 and SPB1

DIOPT Version :10

Sequence 1:NP_650590.1 Gene:Trm7-32 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_009877.1 Gene:SPB1 / 850304 SGDID:S000000559 Length:841 Species:Saccharomyces cerevisiae


Alignment Length:331 Identity:109/331 - (32%)
Similarity:154/331 - (46%) Gaps:56/331 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKT----SKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYG-ILNGVQRAVDLCAAPGSWSQVLS 60
            ||||    ||.:.|.||..||::|:||||:||::.::|.|| .|...:..:|||||||||.||.|
Yeast     1 MGKTQKKNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 65

  Fly    61 RKLYDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDG 125
            :    .|..:.     .||.||:..|.|:..::..|.|||.:.....:.|:. ...||..|:.||
Yeast    66 K----LCPVNS-----LIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYM-KTWKADTVLHDG 120

  Fly   126 APDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKP 190
            ||:|......|.:.|.||.:.||.:|...|...||||.|||:....:.|....|..|:|.:..||
Yeast   121 APNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKP 185

  Fly   191 PSSRPSSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVNRRLVPFIACGDLN---GL 252
            |:||..|.|.||||..|..|:...|::::|             .||...|..    |..|   .:
Yeast   186 PASRNVSAEIFVVCKGFKAPKRLDPRLLDP-------------KEVFEELPD----GQQNMESKI 233

  Fly   253 SDPEEG-KTSSSDESKSNLEY----VYDAV----------------MDDASYPLEFKEILKQVYD 296
            .:||:. :.....|...||.|    :.|.|                :|:..:..:..:.|||..|
Yeast   234 YNPEKKVRKRQGYEEGDNLLYHETSILDFVRTEDPISMLGEMNKFTIDENDHEWKILKKLKQTTD 298

  Fly   297 EQRHII 302
            |.|..|
Yeast   299 EFRSCI 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-32NP_650590.1 RlmE 1..207 CDD:440062 84/210 (40%)
SPB1NP_009877.1 RlmE 1..204 CDD:440062 85/212 (40%)
DUF3381 236..384 CDD:463375 16/69 (23%)
Spb1_C 621..835 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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