DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5220 and ftsj3

DIOPT Version :9

Sequence 1:NP_650590.1 Gene:CG5220 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001292397.1 Gene:ftsj3 / 321247 ZFINID:ZDB-GENE-030131-9828 Length:838 Species:Danio rerio


Alignment Length:310 Identity:98/310 - (31%)
Similarity:144/310 - (46%) Gaps:46/310 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYD 65
            :|||.|||   :|..||:.|:|:||:|||:.::..:..|...:..||||||||.|.||.|:.:  
Zfish     7 VGKTRKDK---FYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFM-- 66

  Fly    66 TCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVT 130
                   ..:..:|.|||..:.||..::.||.|||.:...:|:.... ...|..:|:.||||:|.
Zfish    67 -------PVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKEL-QTWKVDVVLNDGAPNVG 123

  Fly   131 GVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRP 195
            ...:.|.:.|..|.:.||.:|...|..||||:.|:|:......|....|.||||....||.:||.
Zfish   124 ANWQHDAFSQANLTLMALKLACEFLAKGGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQASRN 188

  Fly   196 SSIEAFVVCSDFCLPEGYIPQVINPARD----DIRLLAQKTGSEVNRRLVPFIACGDLNGLSDPE 256
            .|.|.||||..|..|:....:..:|...    |:::   ||..|:..:..|     ...|.||.:
Zfish   189 ESAEIFVVCQGFLAPDKIDNKFFDPKHAFKEVDVQV---KTVKELVNKKKP-----KAEGYSDGD 245

  Fly   257 -------------EGKTSSSDESKSNLEYVYDAVMDD---ASYPLEFKEI 290
                         :.:......||:|     :...||   .|:||...||
Zfish   246 LTLYHKFTITEFLKAENPVDFLSKAN-----EITFDDPLLESHPLTSAEI 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5220NP_650590.1 RlmE 3..211 CDD:223370 77/207 (37%)
ftsj3NP_001292397.1 RlmE 4..203 CDD:223370 78/208 (38%)
DUF3381 233..377 CDD:288694 14/68 (21%)
Spb1_C 624..819 CDD:285075
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362679at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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