DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5220 and SPAC4F10.03c

DIOPT Version :9

Sequence 1:NP_650590.1 Gene:CG5220 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_594746.1 Gene:SPAC4F10.03c / 2543625 PomBaseID:SPAC4F10.03c Length:285 Species:Schizosaccharomyces pombe


Alignment Length:289 Identity:149/289 - (51%)
Similarity:186/289 - (64%) Gaps:39/289 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL-- 63
            ||::||||||.|||.||::|||||||||||.::|.:.:..|.:|.||||||||||||||||:|  
pombe     1 MGRSSKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLSRELLK 65

  Fly    64 -YDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAP 127
             .||....|||.  .|:|||||.||||.|:..||.|||..:|...|:.|| |||.|.|||.||||
pombe    66 NIDTSIAADEKP--MIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHF-GNEPADLVVSDGAP 127

  Fly   128 DVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPS 192
            ||||:|::|||:|.|:|:||.::|.|||:.||.||||||:|...|||.||:::.|:|....||.|
pombe   128 DVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYSQLRLMFRKVSCAKPRS 192

  Fly   193 SRPSSIEAFVVCSDFCLPEGYIPQVINPARDDIRLLAQKTGSEVNRRLVPFIACGDLNGLSDPEE 257
            ||.||||:||||.||..|..:.|.:..|.     .:...|.:   ..:.||||||||:|      
pombe   193 SRASSIESFVVCEDFNPPSNFQPDLTKPL-----CVIDPTNA---HEIAPFIACGDLDG------ 243

  Fly   258 GKTSSSDESKSNLEYVYDAVMDDASYPLE 286
                            |||   ||:||:|
pombe   244 ----------------YDA---DATYPVE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5220NP_650590.1 RlmE 3..211 CDD:223370 126/210 (60%)
SPAC4F10.03cNP_594746.1 RlmE 5..211 CDD:223370 126/208 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 216 1.000 Domainoid score I577
eggNOG 1 0.900 - - E1_COG0293
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5372
Inparanoid 1 1.050 264 1.000 Inparanoid score I735
OMA 1 1.010 - - QHG54241
OrthoFinder 1 1.000 - - FOG0004400
OrthoInspector 1 1.000 - - otm47036
orthoMCL 1 0.900 - - OOG6_102125
Panther 1 1.100 - - LDO PTHR10920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1803
SonicParanoid 1 1.000 - - X3115
TreeFam 00.000 Not matched by this tool.
1312.900

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