DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trm7-32 and spb1

DIOPT Version :10

Sequence 1:NP_650590.1 Gene:Trm7-32 / 42056 FlyBaseID:FBgn0038471 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_593129.1 Gene:spb1 / 2542112 PomBaseID:SPAC1687.11 Length:802 Species:Schizosaccharomyces pombe


Alignment Length:354 Identity:104/354 - (29%)
Similarity:151/354 - (42%) Gaps:72/354 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYDTC 67
            ||:|.:.|.:|:.||::|:|:|:||||:.:::.|..|...:..:|||||||.|.||.|:    ||
pombe     7 KTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASK----TC 67

  Fly    68 ETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGV 132
                 |....|:.|||..:.||........|||.......:.|:. ...||.:|:.||||:|...
pombe    68 -----KPGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYL-KTWKADVVLHDGAPNVGSA 126

  Fly   133 HEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPSS 197
            ...|.|.|.||::.::.:|...|..|||||.|:|:....:.|....:..|.|.:..||||||..|
pombe   127 WLQDAYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVS 191

  Fly   198 IEAFVVCSDFCLPEGYIPQVINP-------------------------------ARDDIRLLAQK 231
            .|.||||..:..|:...|:..:|                               |.||..|....
pombe   192 AEIFVVCRGYKAPKKLDPRFTDPRTVFEEVQEPVTNVDAKVFHPEKRKRSREGYADDDYTLHKTV 256

  Fly   232 TGSEVNRRLVPFIACGD-LNGLSDPEEGKTSSSDESKSNLEYVYDAVMDDASY---------PLE 286
            ..||       |:...| :..|....|......||....| |..|...::...         ..|
pombe   257 LASE-------FVTANDPIQILGTSAEIVFPKDDEECQRL-YNLDVTTEEILLCCSDLQVLGKKE 313

  Fly   287 FKEIL-------------KQVYDEQRHII 302
            |::||             |:|.|||:.::
pombe   314 FRDILRWRLKIRDEMGIGKKVEDEQKTVV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trm7-32NP_650590.1 RlmE 1..207 CDD:440062 77/203 (38%)
spb1NP_593129.1 RlmE 1..203 CDD:440062 77/205 (38%)
DUF3381 235..386 CDD:463375 24/116 (21%)
Spb1_C 593..798 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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