DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18213 and Smyd3

DIOPT Version :10

Sequence 1:NP_650589.2 Gene:CG18213 / 42055 FlyBaseID:FBgn0038470 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_081464.1 Gene:Smyd3 / 69726 MGIID:1916976 Length:428 Species:Mus musculus


Alignment Length:325 Identity:60/325 - (18%)
Similarity:115/325 - (35%) Gaps:93/325 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 KSGGVFASCDVPKGEIVLVENPVYFQF--SAPFLNCELCGVHQQQLYTCDNCRYRSYCSKSCMKS 300
            :..|:.|...:..||::...:|:.:..  .:..:.|:.|.:.:::|..|..||...|||..|.|.
Mouse    14 RGNGLRAVAPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRIAKYCSAKCQKK 78

  Fly   301 DAEVHQYECYGYKI--GLIPMLEANMLFRLFCEAGEYILPAIVD------------YAMDGGILS 351
            ....|:.||...|.  ...|.....:|.|        ::..::|            |.::..|..
Mouse    79 AWPDHRRECSCLKSCKPRYPPDSVRLLGR--------VIVKLMDEKPSESEKLYSFYDLESNISK 135

  Fly   352 NPRD--------AWTFILEHAQEEEKTYNLVGELLATAPDYNLLTREKYTEIVTTAFRLSVFIYN 408
            ...|        |.||  :|...||     :.:.....|.::|.  |.:.:::..:|.:.     
Mouse   136 LTEDKKEGLRQLAMTF--QHFMREE-----IQDASQLPPSFDLF--EAFAKVICNSFTIC----- 186

  Fly   409 DTRLAEKYFYLLALVKTDLITVMAAI---------LLRLGGHVLLNSQRD-------NLCYRQRE 457
            :..:.|        |...|...|:.:         ::..|.|:||.:.|:       .:||    
Mouse   187 NAEMQE--------VGVGLYPSMSLLNHSCDPNCSIVFNGPHLLLRAVREIEAGEELTICY---- 239

  Fly   458 GIDAMNENNDE---------FENCGILPMPTDRISANVFSYYGVNAITDFVDCYNNVHDSLAEIE 513
             :|.:..:.:.         || |..:...|....|::        :|.....:..|.:||.:||
Mouse   240 -LDMLMTSEERRKQLRDQYCFE-CDCIRCQTQDKDADM--------LTGDEQIWKEVQESLKKIE 294

  Fly   514  513
            Mouse   295  294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18213NP_650589.2 None
Smyd3NP_081464.1 SET_SMYD3 5..268 CDD:380980 52/289 (18%)
zf-MYND 49..87 CDD:460312 12/37 (32%)
C-terminal domain, essential for histone methyltransferase activity, nuclear localization and mediates interaction with HSP90AA1. /evidence=ECO:0000250|UniProtKB:Q9H7B4 272..428 7/31 (23%)

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