DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18213 and SmydA-5

DIOPT Version :10

Sequence 1:NP_650589.2 Gene:CG18213 / 42055 FlyBaseID:FBgn0038470 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster


Alignment Length:499 Identity:102/499 - (20%)
Similarity:156/499 - (31%) Gaps:206/499 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 CRAPSASPTCVDAIMARSVLYIKNNQNTTA----CNDLLYYESLDPALKTAEGTIISQILHCICL 147
            ||.|..|..|....|..|||.:.:...|.|    .||  |:..                      
  Fly   113 CRWPVCSAGCKHESMECSVLSLGSGSPTRADARSLND--YFRG---------------------- 153

  Fly   148 FVNREYEASKDKLSVVKGLIEDGTLADRSEVSPFLALIE--QHEE-------------------- 190
                      |.|.|:|.|     |..|...:.:.||:|  .|||                    
  Fly   154 ----------DALLVLKCL-----LLQRQSPTKWSALLEMQSHEEERKGTDLYEEAEKRVVTYLQ 203

  Fly   191 -----RINQARINV----------EFCKKVQTENF--------VPFKG-FKLTRKIPFASQA-CD 230
                 |:.|...|:          ..|..::| ||        |...| |:....:..|.|. ||
  Fly   204 KRFLCRLKQTNPNLLTDCGPEMLHRLCGIIET-NFMVIELPSGVELSGLFRQACMMEHACQPNCD 267

  Fly   231 YSEKSIEKSGGVFASCDVPKGEIVLVENPVYFQFSAPFLNCELCGVHQQQLY---------TCDN 286
            :...:..:...|.|.||:.||:.:.:          .:.|. |.|...:|.:         .|..
  Fly   268 FQFDNKTQQVAVRAGCDLRKGDHLRI----------TYTNI-LWGTQLRQHHLRLTKHFSCRCSR 321

  Fly   287 C----RYRSYCSK-SCMKSDAEVHQYECYGYKIGLIPMLEANMLFRLFCEAGEYILPAIVDYAMD 346
            |    .|.:|.|. :|:   .:|:| .|.|..:.:.| |:.|..::  |:.    .|.|||.|..
  Fly   322 CLDPTEYGTYISALTCL---GDVNQ-TCGGTHLPVDP-LDENTQWK--CDT----CPMIVDGAYV 375

  Fly   347 GGILSNPRDAWTFILEHAQEEEKTYNLVGELLATAPDYN----LLTR--------------EKYT 393
            ..:.|           |..|:      |..|||..|..|    ||.|              .|:|
  Fly   376 AELQS-----------HMTEQ------VEGLLAGCPSANQVELLLARLTHMLHPNHFHTFNLKHT 423

  Fly   394 EI------------------VTTAFRLSVFIYNDTRLAEKYFYLLALVKTDLITVMAAILLR--- 437
            .|                  :....||...:||..|..:.|...||:..|.::..:|..|..   
  Fly   424 LIQLYGNEAGLELGVLSNTQLERKLRLCGELYNVCRRLDPYSIKLAIYVTVILIEVAHTLQEQAR 488

  Fly   438 ---------LG--------GHVLLNSQRDNLCYRQREGIDAMNE 464
                     ||        .|::|..:::::..::      :||
  Fly   489 RAPAEGTSLLGLAQSRLREAHMVLEKEQESVAGKK------LNE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18213NP_650589.2 None
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:460312
SET_SMYD <232..322 CDD:380997 21/101 (21%)
Blue background indicates that the domain is not in the aligned region.

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