DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18213 and SMYD4

DIOPT Version :10

Sequence 1:NP_650589.2 Gene:CG18213 / 42055 FlyBaseID:FBgn0038470 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens


Alignment Length:735 Identity:137/735 - (18%)
Similarity:234/735 - (31%) Gaps:288/735 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SEYITMSEAMCPRNLI---------ECELFLKIL----------------RKTTDKVF--LDFSE 54
            |..:|:|.|...|::.         |.|||||.|                |:..:|.|  .|:: 
Human    22 SVQVTISTAETLRDIFLHSSSLLQPEDELFLKRLSKGYLVGKDSDAPLFYREEGNKKFQEKDYT- 85

  Fly    55 VAEGCLNISKKCMNMKSPTVLKMTLQSLDEIICRAPSASPTCVDAIMARSVLYIKNNQNTTACND 119
               |...:..|.::...|....|:|       |.|            .||.......|..|...|
Human    86 ---GAAVLYSKGVSHSRPNTEDMSL-------CHA------------NRSAALFHLGQYETCLKD 128

  Fly   120 LL------YYESLDP--ALKTAEGTIISQILHCICLF-VNREYEASKDKLSVVKGLIEDGTLADR 175
            :.      |.|.|.|  .|:.||           ||. :.|..|||:....:.:.......||| 
Human   129 INRAQTHGYPERLQPKIMLRKAE-----------CLVALGRLQEASQTISDLERNFTATPALAD- 181

  Fly   176 SEVSPFLALIEQHEERINQARINVEFCKKVQTENFVPFKGFKLTRKIPFA-------------SQ 227
                    ::.|..:| |..|:.:    |:|.::       .||...|.|             ::
Human   182 --------VLPQTLQR-NLHRLKM----KMQEKD-------SLTESFPAALAKTLEDAALREENE 226

  Fly   228 ACDYSEKSIE------KSGGVFASCDVPKGEIVLVEN------------PVYFQFSAPF------ 268
            ....:..||.      |...:.|:.|:..||:::.|:            |.:....:.:      
Human   227 QLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTN 291

  Fly   269 --LNCELCGVHQQQLYTCDNCRYRSYCSKSCMKSDAEV-HQYECYGYKIGLIPMLEANMLFRLFC 330
              |.|..|..|......||.|.|..|||:.|::...|: |:.||        |:           
Human   292 GDLYCHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTEC--------PL----------- 337

  Fly   331 EAGEYILPAIVDYAMDGGILSNPRDAWTFILEHAQEEEKTYNLVGELLATAPDYNLLTREKYTEI 395
                            ||:                                    |||...:..|
Human   338 ----------------GGL------------------------------------LLTLGVFCHI 350

  Fly   396 VTTAFRLSVFI-YND-----TRLAEKYFYLLALVKTDLITVMAAILLRLGGHVLLNSQRDNLCYR 454
               |.||::.: :.|     |:|.:|      :...|:....:            |:|...|.| 
Human   351 ---ALRLTLLVGFEDVRKIITKLCDK------ISNKDICLPES------------NNQVKTLNY- 393

  Fly   455 QREGIDAMNENNDEFENCGILPMPTDRISANVFSYYGVNAITDFVDCYNNVHDSLAEIEPEYPEK 519
               |:....:|.:..|.    |:|            |.:....:.:.||.|.:.|...|      
Human   394 ---GLGESEKNGNIVET----PIP------------GCDINGKYENNYNAVFNLLPHTE------ 433

  Fly   520 FSNDSPIFRFADRLHSICMQKY--EIEAVEDLVSADTLPEQEI--NEILQIFNTSQRCQLLT--- 577
              |.||..:|   |.::|:...  ::||    .|...:|.:.|  :..|:...|.:.|..:|   
Human   434 --NHSPEHKF---LCALCVSALCRQLEA----ASLQAIPTERIVNSSQLKAAVTPELCPDVTIWG 489

  Fly   578 -NIAKYFQQFV--YQYFHKIENT------------VQLKSTLCVTLKAFKQNCGTKNIKAIFLPN 627
             .:.::..|..  .|....|::|            |:|.:.:...:.....:| :.|....|:..
Human   490 VAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSC-SPNTSVSFIST 553

  Fly   628 GKVVGVTAKKVHKGEELVIC 647
            ...:. .::::.||:|::.|
Human   554 VATIR-ASQRIRKGQEILHC 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18213NP_650589.2 None
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815 29/138 (21%)
TPR repeat 68..96 CDD:276809 6/31 (19%)
TPR repeat 101..135 CDD:276809 9/52 (17%)
TPR repeat 143..171 CDD:276809 10/38 (26%)
SET 239..>269 CDD:394802 6/29 (21%)
zf-MYND 296..335 CDD:460312 13/38 (34%)
SET_SMYD4 404..602 CDD:380934 37/202 (18%)
TPR_12 660..726 CDD:315987
TPR_12 698..771 CDD:315987
Blue background indicates that the domain is not in the aligned region.

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