DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4009 and PTGS1

DIOPT Version :9

Sequence 1:NP_001262655.1 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_000953.2 Gene:PTGS1 / 5742 HGNCID:9604 Length:599 Species:Homo sapiens


Alignment Length:493 Identity:112/493 - (22%)
Similarity:194/493 - (39%) Gaps:127/493 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 HPRCLPINLPRGGPIAYHT-GKTCLHFARSVSDADAICPK-------VEEPQPEKL--------- 230
            :.|.|| ::|:..|....| ||      :.:.||..:..:       :.:||...|         
Human   147 YTRILP-SVPKDCPTPMGTKGK------KQLPDAQLLARRFLLRRKFIPDPQGTNLMFAFFAQHF 204

  Fly   231 ---------------TVATAY-LDLSSIYGNNPSQNRKVRLFKGGLLKTSYTNGQHW------LP 273
                           |.|..: :||..|||:|..:..::||||.|.||....:|:.:      .|
Human   205 THQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGEMYPPSVEEAP 269

  Fly   274 VSQNENGECGAKSECYIVPDIRNRFSPTIALLQTLLVREHNRLAENLALINPDHSDERIFQEARK 338
            |..:.......:|:..:..::.. ..|.:.|..||.:|||||:.:.|...:|...||::||..|.
Human   270 VLMHYPRGIPPQSQMAVGQEVFG-LLPGLMLYATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRL 333

  Fly   339 INIAQFQKITYYDWL--------------PLFVGRTYTYLNGLIYPVEPTEYVNDYDETVNPAAY 389
            |.|.:..||...:::              .|..|..:.|.|.:     ..|:.:.|.  .:|...
Human   334 ILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRI-----AMEFNHLYH--WHPLMP 391

  Fly   390 AEFSAAAFRYAHTQIPGWFSLVAPNRRSNRTMRLSDFLDRTETIRLLDTSDNFDALLRGLATQLH 454
            ..|...:..|::.|                      ||..|.  .|:|.  ..:||:...:.|:.
Human   392 DSFKVGSQEYSYEQ----------------------FLFNTS--MLVDY--GVEALVDAFSRQIA 430

  Fly   455 KRSDG--NIDREIKHYFNRKEFEEYGSDLKSID-IQRARDFGLASYNDVREFCGLRRAVDWADFA 516
            .|..|  |:|..|.|.              ::| |:.:|:..|..:|:.|:..|::   .:..| 
Human   431 GRIGGGRNMDHHILHV--------------AVDVIRESREMRLQPFNEYRKRFGMK---PYTSF- 477

  Fly   517 HEIPGEK--ISLLRRLYATPDDVELGVGGTLEYHVPDALFGPTLLCVIGKQF-LNTRRGDRF--- 575
            .|:.|||  .:.|..||...|.:|...|..||...|:::||.::: .||..| |....|:..   
Human   478 QELVGEKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMI-EIGAPFSLKGLLGNPICSP 541

  Fly   576 -FFERENEG---GFSRAQLAEIRK-VSLSSLFCSNANY 608
             :::....|   ||:..:.|.::| |.|::..|...::
Human   542 EYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSF 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_001262655.1 An_peroxidase_like 77..>367 CDD:265428 56/236 (24%)
An_peroxidase 95..610 CDD:281139 112/493 (23%)
peroxinectin_like 228..605 CDD:188655 100/435 (23%)
PTGS1NP_000953.2 EGF_CA 32..69 CDD:238011
prostaglandin_endoperoxide_synthase 89..575 CDD:188648 111/487 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7941
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.760

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