DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4009 and ptgs2b

DIOPT Version :9

Sequence 1:NP_001262655.1 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001020675.1 Gene:ptgs2b / 559020 ZFINID:ZDB-GENE-041014-323 Length:606 Species:Danio rerio


Alignment Length:623 Identity:135/623 - (21%)
Similarity:220/623 - (35%) Gaps:185/623 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YNGNNVHN----SWAEPSASQQPLRCGVPPRNCLNDTRNL--HYRTLDGSCNNLLYPEFGIAVSR 116
            |.|.|...    :|.:.|....|           |....:  |:::|....||:.:...||  .|
Zfish    51 YYGQNCTTPEFLTWVKVSLKPSP-----------NTVHYILTHFKSLWNIINNVSFLRNGI--MR 102

  Fly   117 YRRLLPPRQVEQAP--NARLISLSLYGEQTRNDRFRTMAAMQWGQFVAHDISQLSTQGAPQDCCA 179
            |........::..|  ||.      ||.::            |..:     |.||          
Zfish   103 YVLTSRAHLIDSPPTFNAD------YGYKS------------WEAY-----SNLS---------- 134

  Fly   180 EPRHPRCLPINLPRGGPIAYH-TGKTCLHFARSVSDADAICPK-------VEEPQPEKLTVA--- 233
              .:.|.|| .:||..|.... .||      :.:.|...:..|       :.:||...|..|   
Zfish   135 --YYTRTLP-PVPRDCPTPMGVAGK------KELPDVKMLAEKLLLRRKFIPDPQRTNLMFAFFA 190

  Fly   234 -------------------TAY---LDLSSIYGNNPSQNRKVRLFKGGLLKTSYTNGQHWLPVSQ 276
                               ||.   :||:.|||.|..:..|:||||.|.|:....:|:.:.|   
Zfish   191 QHFTHQFFKSDMKKGPAFTTALNHGVDLAHIYGQNLDRQHKLRLFKDGKLRYQILDGEVYPP--- 252

  Fly   277 NENGECGAKSECYI-------VPDIRNRFS---------PTIALLQTLLVREHNRLAENLALINP 325
                   ..||..:       ||:.| ||:         |.:.:..|:.:|||||:.:.|...:|
Zfish   253 -------TVSEVQVDMHYPPHVPESR-RFAVGHEAFGLVPGLMMYATIWLREHNRVCDILKQEHP 309

  Fly   326 DHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPV--EPTEYVND---YDETVN 385
            |..|||:||.:|.|.|.:..||...|::        .:|:|..:.:  :|....|:   |...::
Zfish   310 DWDDERLFQTSRLILIGETIKIVIEDYV--------QHLSGYYFKLKFDPELLFNERFQYQNRIS 366

  Fly   386 PAAYAEFSAAAFRYAHTQIPGWFSLVAPNRRSNRTMRLSDFLDRTETIRLLDTSDNFDALLRGLA 450
                :||:  ...:.|..:|..|.:      .:.......||..|..:    |....::|:....
Zfish   367 ----SEFN--TLYHWHPLMPDDFHI------QDEVYNYQQFLFNTSIL----TDYGVNSLVESFN 415

  Fly   451 TQLHKRSDGN-------IDREIKHYFNRKEFEEYGSDLKSIDIQRARDFGLASYNDVREFCGLRR 508
            .|:..|..|.       :...||...|.::..     .:||:..|.| |.:..|....|..|.: 
Zfish   416 KQIAGRVAGGRNVAPAVLRVAIKSIENSRQMR-----YQSINAYRKR-FNMKPYRSFEEMTGEK- 473

  Fly   509 AVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVPDALFGPTLLCVIGKQFLNTRRGD 573
                         |..:.|..:|...|.|||..|..:|....:|:||.|::.:.....|....|:
Zfish   474 -------------EMAAELEEMYGDVDAVELYAGLLVEKPRSNAIFGETMVEMGAPYSLKGLMGN 525

  Fly   574 RF----FFERENEGGFSRAQLAEIRKVSLSSLFCSNAN 607
            ..    :::....||  :.....:...||.:|.|:|.|
Zfish   526 PICSPEYWKPSTFGG--KVGFEIVNSASLQNLVCNNVN 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_001262655.1 An_peroxidase_like 77..>367 CDD:265428 78/342 (23%)
An_peroxidase 95..610 CDD:281139 127/580 (22%)
peroxinectin_like 228..605 CDD:188655 97/433 (22%)
ptgs2bNP_001020675.1 EGF_CA 21..57 CDD:238011 3/5 (60%)
prostaglandin_endoperoxide_synthase 77..565 CDD:188648 128/586 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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