DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4009 and ptgs2b

DIOPT Version :10

Sequence 1:NP_650588.2 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001020675.1 Gene:ptgs2b / 559020 ZFINID:ZDB-GENE-041014-323 Length:606 Species:Danio rerio


Alignment Length:623 Identity:135/623 - (21%)
Similarity:220/623 - (35%) Gaps:185/623 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YNGNNVHN----SWAEPSASQQPLRCGVPPRNCLNDTRNL--HYRTLDGSCNNLLYPEFGIAVSR 116
            |.|.|...    :|.:.|....|           |....:  |:::|....||:.:...||  .|
Zfish    51 YYGQNCTTPEFLTWVKVSLKPSP-----------NTVHYILTHFKSLWNIINNVSFLRNGI--MR 102

  Fly   117 YRRLLPPRQVEQAP--NARLISLSLYGEQTRNDRFRTMAAMQWGQFVAHDISQLSTQGAPQDCCA 179
            |........::..|  ||.      ||.::            |..:     |.||          
Zfish   103 YVLTSRAHLIDSPPTFNAD------YGYKS------------WEAY-----SNLS---------- 134

  Fly   180 EPRHPRCLPINLPRGGPIAYH-TGKTCLHFARSVSDADAICPK-------VEEPQPEKLTVA--- 233
              .:.|.|| .:||..|.... .||      :.:.|...:..|       :.:||...|..|   
Zfish   135 --YYTRTLP-PVPRDCPTPMGVAGK------KELPDVKMLAEKLLLRRKFIPDPQRTNLMFAFFA 190

  Fly   234 -------------------TAY---LDLSSIYGNNPSQNRKVRLFKGGLLKTSYTNGQHWLPVSQ 276
                               ||.   :||:.|||.|..:..|:||||.|.|:....:|:.:.|   
Zfish   191 QHFTHQFFKSDMKKGPAFTTALNHGVDLAHIYGQNLDRQHKLRLFKDGKLRYQILDGEVYPP--- 252

  Fly   277 NENGECGAKSECYI-------VPDIRNRFS---------PTIALLQTLLVREHNRLAENLALINP 325
                   ..||..:       ||:.| ||:         |.:.:..|:.:|||||:.:.|...:|
Zfish   253 -------TVSEVQVDMHYPPHVPESR-RFAVGHEAFGLVPGLMMYATIWLREHNRVCDILKQEHP 309

  Fly   326 DHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPV--EPTEYVND---YDETVN 385
            |..|||:||.:|.|.|.:..||...|::        .:|:|..:.:  :|....|:   |...::
Zfish   310 DWDDERLFQTSRLILIGETIKIVIEDYV--------QHLSGYYFKLKFDPELLFNERFQYQNRIS 366

  Fly   386 PAAYAEFSAAAFRYAHTQIPGWFSLVAPNRRSNRTMRLSDFLDRTETIRLLDTSDNFDALLRGLA 450
                :||:  ...:.|..:|..|.:      .:.......||..|..:    |....::|:....
Zfish   367 ----SEFN--TLYHWHPLMPDDFHI------QDEVYNYQQFLFNTSIL----TDYGVNSLVESFN 415

  Fly   451 TQLHKRSDGN-------IDREIKHYFNRKEFEEYGSDLKSIDIQRARDFGLASYNDVREFCGLRR 508
            .|:..|..|.       :...||...|.::..     .:||:..|.| |.:..|....|..|.: 
Zfish   416 KQIAGRVAGGRNVAPAVLRVAIKSIENSRQMR-----YQSINAYRKR-FNMKPYRSFEEMTGEK- 473

  Fly   509 AVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVPDALFGPTLLCVIGKQFLNTRRGD 573
                         |..:.|..:|...|.|||..|..:|....:|:||.|::.:.....|....|:
Zfish   474 -------------EMAAELEEMYGDVDAVELYAGLLVEKPRSNAIFGETMVEMGAPYSLKGLMGN 525

  Fly   574 RF----FFERENEGGFSRAQLAEIRKVSLSSLFCSNAN 607
            ..    :::....||  :.....:...||.:|.|:|.|
Zfish   526 PICSPEYWKPSTFGG--KVGFEIVNSASLQNLVCNNVN 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_650588.2 An_peroxidase 95..617 CDD:460804 127/580 (22%)
ptgs2bNP_001020675.1 EGF_CA 21..57 CDD:238011 3/5 (60%)
prostaglandin_endoperoxide_synthase 77..565 CDD:188648 128/586 (22%)

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