DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4009 and cd

DIOPT Version :10

Sequence 1:NP_650588.2 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster


Alignment Length:688 Identity:194/688 - (28%)
Similarity:299/688 - (43%) Gaps:125/688 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YSAMEPSLSRSKRSSFDIRPGVSDGSLDALIKEFMPKYNGNNVHNSWAE----PSASQQPLRCGV 81
            |...:.::..:||.::..:||.|                  |:  .|..    |..:...|.|..
  Fly   170 YVENQATIDIAKRFNYTKQPGRS------------------NI--GWGPKIVLPDPTVLRLECDF 214

  Fly    82 PPRNCLNDTRNLHYRTLDGSCNNLLYPE-FGIAVSRYRRLLPPRQVE-----------QAPNARL 134
                      |..||...|.|||..:|. :|.::..|||::.|...:           :.|.||.
  Fly   215 ----------NARYRRSTGVCNNKQHPRTYGASMVPYRRMVSPDYADGIAAPRVSHHGRLPPARQ 269

  Fly   135 ISLSLYGEQTRNDRFRTMAAMQWGQFVAHDIS----QLSTQGAPQDCC---AEPRHPRCLPINLP 192
            :||.::......|...|:....:|||:.|||:    ..|.:|...|||   ...:||.|.|:::.
  Fly   270 VSLKIHRSSYETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDIL 334

  Fly   193 RGGPIAYHTGKTCLHFARSVSDADAICPKVEEPQPE-------KLTVATAYLDLSSIYGNNPSQN 250
            ...|.......:|::|.||.            |.|.       :|..|||::|.|.:|||...:.
  Fly   335 PDDPYYKQYNISCMNFVRSA------------PAPTGRFGPRMQLNQATAFIDASVVYGNLEQRQ 387

  Fly   251 RKVRLFKGGLLKTSYT-NGQHWLPVSQNENGECG------AKSECYIVPDIRNRFSPTIALLQTL 308
            .::|.|..|.|:...| :|:..||:|.|....|.      ....|:...|.|...:..:..:..|
  Fly   388 NQLRSFINGSLRMFVTDDGRQLLPISSNPADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLL 452

  Fly   309 LVREHNRLAENLALINPDHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPVEP 373
            ..|.||.||..|...||...|||::||||||..||...|||.::||:.:|:..:...||:.....
  Fly   453 WARHHNYLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHN 517

  Fly   374 TEYVNDYDETVNPAAYAEFSAAAFRYAHTQIPGWFSLVAPNRRSNRTMRLSDFLDRTETIRL--- 435
            ....:.||..|:|:....|:|||||:|||.:||.|::    .|.|.|         .|.|.|   
  Fly   518 LNAPDTYDPEVDPSIANCFAAAAFRFAHTLLPGLFNI----SRDNST---------PEAIELHKM 569

  Fly   436 ------LDTSDNFD-ALLRGLATQLHKRSDGNIDREIKHYFNRKEFEE--------YGSDLKSID 485
                  |......| ||:....|.:.:     :||.......:|.||.        .|.||.|::
  Fly   570 LFNPFSLWAEHGIDHALMTAANTPVMQ-----VDRFFSLEVTQKLFEGTAEDRVPLCGLDLVSLN 629

  Fly   486 IQRARDFGLASYNDVREFCGLRRAVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVP 550
            |||.||.|:.||...|..|.|.....|.:.:..|....:..:|::|.:|.||::..|...|..:.
  Fly   630 IQRGRDHGIPSYPVFRRHCRLPTVDTWEEMSQAIDNATLDSIRQIYESPQDVDVYTGALSEPPLD 694

  Fly   551 DALFGPTLLCVIGKQFLNTRRGDRFFFERE-NEGGFSRAQLAEIRKVSLSSLFCSNANYLHLIQP 614
            .|:|||.|.|::..|||..:.||..::||: ....|::||||||.|.||:::.|.|::.:..::.
  Fly   695 GAIFGPLLSCMVSDQFLRLKLGDSHWYERKMGPQKFTKAQLAEIYKTSLAAIICRNSDGITRVRE 759

  Fly   615 NVFV-FPNSHNLLLNC--------NFIPQIDLSKWQDL 643
            :|.. ..:..|..::|        ||.|..:..:.|||
  Fly   760 HVMQRLRDGGNPHVDCQDLEGFHFNFEPWSEKQQPQDL 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_650588.2 An_peroxidase 95..617 CDD:460804 173/573 (30%)
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 173/573 (30%)

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