DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4009 and Irc

DIOPT Version :9

Sequence 1:NP_001262655.1 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster


Alignment Length:664 Identity:186/664 - (28%)
Similarity:296/664 - (44%) Gaps:114/664 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PSLSRSKRSSFDIRPGVSDGSLDALIKEFMPKYNGNNVHNSWAEPSASQQPLRCGVPPR----NC 86
            |||:..|.:...::  :...||.....|.:|    ||:..........|:||..|...|    |.
  Fly    85 PSLASKKDNKLALK--ILKSSLLVFNSECLP----NNIDGDKCRSYLEQKPLPEGSSLRTECENS 143

  Fly    87 LNDTRNLHY--RTLDGSCN-----NLLYPEFGIAVSRYRRLLPPRQVEQAPNARLISLSLY---- 140
            |...|..||  |.|.||.:     ..::|..|      ||       |..|.|..||..||    
  Fly   144 LKGNREGHYAFRRLLGSSHYRNGFYQMFPNSG------RR-------ETVPAAWSISKELYEPDH 195

  Fly   141 ---GEQTRNDRFRTMAAMQWGQFVAHD----ISQLSTQGAPQDCCA------EPR--HPRCLPIN 190
               .:|...:....:|..||.|||.||    :||..:.|||.:||:      :||  ||.|.||.
  Fly   196 IQISKQQTFESNSNLALPQWAQFVEHDLSKPVSQSMSNGAPIECCSRDQINLQPRHHHPACAPIL 260

  Fly   191 LPRGGPIAYHTGKTCLHFARS---VSDADAICPKVEEPQPEKLTVATAYLDLSSIYGNNPSQNRK 252
            ...||.   :...:||::.||   |:|.:.       ...|:|..||..||||.:||...:..||
  Fly   261 YQPGGK---YDVPSCLNYVRSALAVADCNF-------GGAEQLNQATGSLDLSQLYGFTAAAERK 315

  Fly   253 VRLFKGGLLKTS----YTNGQHWLPVSQNENGE--CG----AKSECYIVPDIRNRFSPTIALLQT 307
            :|:.:||||:::    :.|.  .||::.:..|.  |.    ....|:...|.|...||...|:.|
  Fly   316 LRVLEGGLLRSTPRGEFDNA--LLPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPFSILIYT 378

  Fly   308 LLVREHNRLAENLALINPDHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPVE 372
            :.:|.||::|..|...||..|||::||.|:.:|:..::::...:|||..:|:.   ::..|...:
  Fly   379 IFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLGQK---MSSEIRRKQ 440

  Fly   373 PTEYVNDYDETVNPAAYAEFSAAAFRYAHTQIPGWF------SLVAPNRRSNR---------TMR 422
            |...:    |..|     ||:.||.|:..:.:|...      ::|....::|:         |..
  Fly   441 PNRAL----EVSN-----EFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYVFISKELPTKN 496

  Fly   423 LSDFLDRTETIRLLDTSDNFDALLRGLATQLHKRSDGNIDREIKHYFNRKEFEEYGSDLKSIDIQ 487
            |.:..:.....:|..||...:.:|..|..|...:.|......:..:   |:.:...:|:.:.|||
  Fly   497 LFELKEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGVVWH---KDTKPTHADILAFDIQ 558

  Fly   488 RARDFGLASYNDVREFCGLRRAVD-WADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVPD 551
            |.||.||..|....|.|.|.|.|: |.||.|.||.:.:..|:.:||:..||:|.|||..|..|..
  Fly   559 RGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVLDKLKTIYASWADVDLIVGGISENPVHG 623

  Fly   552 ALFGPTLLCVIGKQFLNTRRGDRFFFERENEGGFSRAQLAE-IRKVSLSSLFCSNANYLHLIQPN 615
            :: |||..|:|.:||::..:      :.:.:......:|.| .|..:.:.|.|.|:. |..:..|
  Fly   624 SI-GPTFSCIISEQFVHVLK------QNQQKAVQKHTELVEQYRHFNGTKLLCLNSG-LSAVPQN 680

  Fly   616 VFVFPNSHNLLLNC 629
            :|..|::.|.:::|
  Fly   681 IFQLPSARNQMVSC 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_001262655.1 An_peroxidase_like 77..>367 CDD:265428 101/332 (30%)
An_peroxidase 95..610 CDD:281139 161/570 (28%)
peroxinectin_like 228..605 CDD:188655 113/403 (28%)
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 161/567 (28%)
An_peroxidase_like 290..637 CDD:265428 106/364 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 107 1.000 Domainoid score I2172
eggNOG 1 0.900 - - E1_KOG2408
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2076
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11475
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.970

Return to query results.
Submit another query.