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Protein Alignment CG4009 and Igsf9b

DIOPT Version :9

Sequence 1:	NP_001262655.1	Gene:	CG4009 / 42054	FlyBaseID:	FBgn0038469	Length:	649	Species:	Drosophila melanogaster
Sequence 2:	NP_001363879.1	Gene:	Igsf9b / 315510	RGDID:	1564717	Length:	1441	Species:	Rattus norvegicus

Alignment Length:	249	Identity:	53/249 - (21%)
Similarity:	76/249 - (30%)	Gaps:	102/249 - (40%)

- Green bases have known domain annotations that are detailed below.

  Fly    65 NSWAEPSASQQPLRCGVPPRNCLNDTRNLHYRTLDGSCNNLLYPEFGIAVSRYRRLLPPRQVEQA 129
            |:.|.|..:.:||....||| ||...|.                :.|:.:|    .|||.. ...
  Rat   604 NTLAFPVTTPEPLVLVTPPR-CLTANRT----------------QQGVLLS----WLPPAN-HSF 646

  Fly   130 PNARLISLSLYGEQTRNDRFRTMAAMQW-----------GQFVAHDISQ-----LSTQGAPQDCC 178
            |..|.|.....||             :|           |:|.|.|:||     .......||..
  Rat   647 PIDRYIMEFRVGE-------------RWEMLDDAIPGTDGEFFAKDLSQDTWYEFRVLAVMQDLI 698

  Fly   179 AEPRHPRCLPINLPRGGPIAYHTGKTCLHFARSVSDADAICPKVEEPQPEKLT------------ 231
            :||.:             ||            .||..|..      |||: ||
  Rat   699 SEPSN-------------IA------------GVSSTDIF------PQPD-LTDDGLARPVLAGI 731

  Fly   232 VAT-AYLDLSSIYGN------NPSQNRKVRLFKGGLLKTSYTNGQHWLPVSQNE 278
            ||| .:|..:.::..      |..:.||::..|...|..::.......|:|..:
  Rat   732 VATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSGK 785

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.