DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4009 and Ptgs1

DIOPT Version :10

Sequence 1:NP_650588.2 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_058739.4 Gene:Ptgs1 / 24693 RGDID:3439 Length:602 Species:Rattus norvegicus


Alignment Length:420 Identity:98/420 - (23%)
Similarity:171/420 - (40%) Gaps:83/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 LDLSSIYGNNPSQNRKVRLFKGGLLKTSYTNGQHWLPVSQNEN------------GECGAKSECY 289
            :||..|||::..:...:||||.|.||....:|:.:.|..:..:            .:.....|.:
  Rat   230 VDLGHIYGDSLERQYHLRLFKDGKLKYQVLDGEVYPPSVEQASVLMRYPPGVPPEKQMAVGQEVF 294

  Fly   290 IVPDIRNRFSPTIALLQTLLVREHNRLAENLALINPDHSDERIFQEARKINIAQFQKITYYDWLP 354
                   ...|.:.|..|:.:|||||:.:.|...:|...||::||..|.|.|.:..||...::: 
  Rat   295 -------GLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGETIKIIIEEYV- 351

  Fly   355 LFVGRTYTYLNGLIYPVEPTEYVNDYD-ETVNPAAYAEFSAAAFRYAHTQIPGWFSLVAPN-RRS 417
                   .:|:|....::       :| |.:..|.:...:..|..:.|  :..|..|:..: :..
  Rat   352 -------QHLSGYFLQLK-------FDPELLFRAQFQYRNRIALEFNH--LYHWHPLMPDSFQVG 400

  Fly   418 NRTMRLSDFLDRTETIRLLDTSDNFDALLRGLATQLHKRSDG--NIDREIKHYFNRKEFEEYGSD 480
            ::......||..|.  .|:|.  ..:||:...:.|...|..|  |.|..:.|         ...|
  Rat   401 SQEYSYEQFLFNTS--MLVDY--GVEALVDAFSRQRAGRIGGGRNFDYHVLH---------VAED 452

  Fly   481 LKSIDIQRARDFGLASYNDVREFCGLRRAVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTL 545
            :    |:.:|:..|.|:|:.|:..||:....:.:|..|  .|..:.|..||...|.:|...|..|
  Rat   453 V----IKESREMRLQSFNEYRKRFGLKPYTSFQEFTGE--KEMAAELEELYGDIDALEFYPGLML 511

  Fly   546 EYHVPDALFGPTLLCVIGKQF-LNTRRGDRF----FFERENEG---GFSRAQLAEIRKVSLSSLF 602
            |...|::|||.::: .:|..| |....|:..    :::....|   ||:....|.::|     |.
  Rat   512 EKCQPNSLFGESMI-EMGAPFSLKGLLGNPICSPEYWKPSTFGGDVGFNIVNTASLKK-----LV 570

  Fly   603 CSNAN---YLHLIQP-------NVFVFPNS 622
            |.|..   |:....|       :|||.|::
  Rat   571 CLNTKTCPYVSFRVPDYPGDDGSVFVRPST 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_650588.2 An_peroxidase 95..617 CDD:460804 94/413 (23%)
Ptgs1NP_058739.4 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 92/396 (23%)
Blue background indicates that the domain is not in the aligned region.

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