DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4009 and ptgs2a

DIOPT Version :9

Sequence 1:NP_001262655.1 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_705943.1 Gene:ptgs2a / 246227 ZFINID:ZDB-GENE-020530-2 Length:601 Species:Danio rerio


Alignment Length:578 Identity:122/578 - (21%)
Similarity:211/578 - (36%) Gaps:173/578 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HYRTLDGSCNNLLYPEFGIAVSRYRRLLPPRQVEQAP--NA--------RLISLSLYGEQTRNDR 148
            ||:::....|::.|...||  .||..|.....||..|  ||        ...:||.|        
Zfish    83 HYKSIWDIINSISYLRDGI--MRYILLSRSHLVESPPTYNADYGYKSWEAYSNLSYY-------- 137

  Fly   149 FRTMAAMQWGQFVAHDISQLSTQGAPQDCCAEPRHPRCLPINLPRGGPIAYHTGKTCLHFARSVS 213
            .||:|.:                  ||:|...         :||.               |:.|.
Zfish   138 TRTLAPL------------------PQNCPTP---------DLPN---------------AKQVV 160

  Fly   214 DADAICPKVEEPQPEKLTVATAY---------------------------LDLSSIYGNNPSQNR 251
            : ..:..|...|.|::.::..|:                           :||..|||.......
Zfish   161 E-QVLLRKQFIPDPQRSSLMFAFFAQHFSHQFFKSDFKKGPAFTKALGHGVDLGHIYGETLEVQH 224

  Fly   252 KVRLFKGGLLKTSYTNGQHWLPVSQNENGECGAKSECYIVPDI--RNRFS---------PTIALL 305
            |:||||.|.||....:|:.:.|:.::      .:.|.:..|.|  ..:|:         |.:.:.
Zfish   225 KLRLFKDGKLKYQVVDGEVYPPLVKD------VQVEMHYPPHIPEEQKFAVGHEAFGLVPGLMMY 283

  Fly   306 QTLLVREHNRLAENLALINPDHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYP 370
            .|:.:|||||:.:.:...:||..||||||..|.|.|.:..||...|::        .:|:|..:.
Zfish   284 ATIWLREHNRVCDIMKQEHPDWDDERIFQTTRLILIGETIKIVIEDYV--------QHLSGYNFK 340

  Fly   371 V--EPTEYVNDYDETVNPAAYAEFSAAAFRYAHTQIP----------GWFSLVAPNRRSNRTMRL 423
            :  :|....::..:..|..| |||:  ...:.|..:|          |:...|. |.....|..:
Zfish   341 LKFDPELIFSERFQYQNRIA-AEFN--TLYHWHPLLPDNFQIQDQIYGYHQFVF-NNSIVTTHGI 401

  Fly   424 SDFLD--RTETIRLLDTSDNFDALLRGLATQLHKRSDGNIDREIKHYFNRKEFEEYGSDLKSIDI 486
            .:.:|  ..:|...:....|....::|:|.::.:::     |::::    :.|..|         
Zfish   402 RNMVDSFTKQTAGRVSGGRNLPPAVQGVAVKVLEQT-----RQMRY----QSFNAY--------- 448

  Fly   487 QRARDFGLASYNDVREFCGLRRAVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVPD 551
              .|.|.:..|:...|..|.:      |.|.:        |:.||...|.|||..|..:|...|:
Zfish   449 --RRRFNMKPYSSFEEMTGDK------DLAAQ--------LKELYGHVDKVELYPGLLVEKSRPN 497

  Fly   552 ALFGPTLLCVIGKQFLNTRRGDRF----FFERENEGGFSRAQLAEIRKVSLSSLFCSN 605
            ::||.|::.:.....|....|:..    :::....||  :.....:...||..|.|.|
Zfish   498 SVFGETMVEMGAPYSLKGLMGNAICSPEYWKPSTFGG--KVGFDIVNSASLKKLVCLN 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_001262655.1 An_peroxidase_like 77..>367 CDD:265428 72/320 (23%)
An_peroxidase 95..610 CDD:281139 121/577 (21%)
peroxinectin_like 228..605 CDD:188655 91/432 (21%)
ptgs2aNP_705943.1 EGF_CA 25..58 CDD:238011
prostaglandin_endoperoxide_synthase 78..559 CDD:188648 122/578 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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