DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4009 and skpo-3

DIOPT Version :10

Sequence 1:NP_650588.2 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_495511.1 Gene:skpo-3 / 174191 WormBaseID:WBGene00017968 Length:1000 Species:Caenorhabditis elegans


Alignment Length:579 Identity:182/579 - (31%)
Similarity:276/579 - (47%) Gaps:68/579 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NLHYRTLDGSCNNLL-YPEFGIAVSRYRRLLP---PRQVEQ---------APNARLISLSLYGEQ 143
            |..:|||||:|||:. .|..|.:...|.||||   ..:|.:         .|:.|.|:..|...|
 Worm   461 NAMFRTLDGTCNNMKGEPLRGASYRPYTRLLPTIYDNEVSEPVGSLFTDARPSPREITRRLTSSQ 525

  Fly   144 --TRNDRFRTMAAMQWGQFVAHDISQLSTQGAPQDCC--AEPRHPRCLPINLPRGGPIAYHTGKT 204
              ..:..:..: .||:|||::||:::  |...|...|  .:....||:.:      ||.:.....
 Worm   526 ASVESPDYNAL-IMQFGQFISHDMAK--TTLVPSSKCNVCQNITSRCMSV------PITFDDSNA 581

  Fly   205 ------CLHFARSVSDADAICPKVEEPQPEKLTVATAYLDLSSIYGNNPSQNRKVRLFKGGLLKT 263
                  |:..:||    ..||........::|...|.|:|.|.|||::...::|.|....|.||.
 Worm   582 NFRQAQCIRVSRS----SPICGSGNLKPRQQLNENTGYIDASPIYGSSVHDSKKFRDGNSGFLKL 642

  Fly   264 SYTNGQHWLPVSQNENGECGAKSECYIV---PDIRNRFSPTIALLQTLLVREHNRLAENLALINP 325
            ...||:.:||..||   :|..:.:|.::   .|.|......::...|:...|||||......:||
 Worm   643 PMFNGKAFLPFDQN---KCRNRGQCSVIFTAGDSRVNLFVGLSAWHTIFTEEHNRLVTAFKRLNP 704

  Fly   326 DHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPVEPTEYVNDYDETVNPAAYA 390
            ....||::|||||:..||.|.|.|.:|||..:|.::..:.|        :| ..||..|:.....
 Worm   705 HWDGERLYQEARKMIGAQVQAIVYREWLPKVLGASFATVVG--------DY-RGYDSDVDSTVAN 760

  Fly   391 EFSAAAFRYAHTQIPGWFSLVAPNRRSNRTMRLSDFLDRTETIRLLDTSDNFDALLRGLATQLHK 455
            ||::||||:.|..|..::..: .|...|.:.....|...|....:|......|.|:||:.:|..|
 Worm   761 EFTSAAFRFGHGMIQEFYQRL-DNSFRNISFGALPFQKGTLHSDVLVNEGGVDPLIRGMFSQNVK 824

  Fly   456 RSDGNIDREIKHYFNRKEFEEYGSDLKSIDIQRARDFGLASYNDVREFCGLRRAVDWADFAHEI- 519
            |.........::.|.       .:||.:|:|||.||.|..:|...||.||:..|.::...:.|| 
 Worm   825 RPQRVTTTVTENMFG-------STDLSTINIQRGRDHGHPAYVKYRELCGMGTAFNFEHLSREIL 882

  Fly   520 -PGEKISLLRRLYATPDDVELGVGGTLEYHVPDALFGPTLLCVIGKQFLNTRRGDRFFFERENEG 583
             .|.: :.|:.:|.:.|.::|.||..||..:...|.|||:.|:||.||..||.||||::  ||.|
 Worm   883 NTGTR-NKLQEIYGSVDKIDLWVGALLEDPIIRGLVGPTVACIIGPQFKRTRDGDRFYY--ENPG 944

  Fly   584 GFSRAQLAEIRKVSLSSLFCSNANYLHLIQPNVFVFPNSHNLLLNCNFIPQIDLSKWQD 642
            .|||.||.||||.|||.:.|.|.|.:..|....|...:    ::.|:.||.:||::|:|
 Worm   945 VFSRRQLVEIRKSSLSRIICDNTNTISTIPREAFRVGH----MVPCSQIPSMDLNQWRD 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_650588.2 An_peroxidase 95..617 CDD:460804 173/549 (32%)
skpo-3NP_495511.1 ShKT 41..75 CDD:214586
An_peroxidase 464..978 CDD:460804 173/549 (32%)
Blue background indicates that the domain is not in the aligned region.

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