DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4009 and duox2

DIOPT Version :9

Sequence 1:NP_001262655.1 Gene:CG4009 / 42054 FlyBaseID:FBgn0038469 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_017947900.2 Gene:duox2 / 100486050 XenbaseID:XB-GENE-6047411 Length:1517 Species:Xenopus tropicalis


Alignment Length:582 Identity:163/582 - (28%)
Similarity:244/582 - (41%) Gaps:106/582 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NDTRNLHYRTLDGSCNNLLYPEFGIAVSRYRRLLP----------PRQVEQAPNARLIS-LSLYG 141
            ||. |...:..||..|||.|...|...|:..|.:|          |::.| .||.|.|| :...|
 Frog    20 NDI-NWEVQRYDGWYNNLAYHSTGSPGSKLLRHIPAFYTDGVYQVPKEPE-LPNPRSISNVVTKG 82

  Fly   142 EQ-TRNDRFRTMAAMQWGQFVAHDISQLSTQGAPQDCCAEPRHPRCLPINLPRGGPI--AYHTGK 203
            :. ..:.|..|:.|:.:|.   |.:|::...|.|. |.||     .|.|.:|:|..:  ..:|.|
 Frog    83 KSGLPSSRNLTVMAISFGY---HVLSEVVYTGKPA-CPAE-----FLNIEIPKGDLVFDRTNTSK 138

  Fly   204 TCLHFARSVSDADAICPKVEEPQPEKLTVATAYLDLSSIYGNNPSQNRKVRLFKGGLLKTSYTNG 268
            ..:.|.||....|.  .:......:.:...:|::|.|||||::.|....:|.|.||.|.:....|
 Frog   139 VVIPFQRSKWYPDT--GRSPNNPRDHVNSVSAWIDGSSIYGSSHSWCDALRNFSGGKLASGPDEG 201

  Fly   269 -----QHWLP---VSQNENGECGAKSECYIVPDIRNRFSPTIALLQTLLVREHNRLAENLALINP 325
                 :..||   |.....||.| .:..|...:.|...||.:..|..|..|.||..|:..|..||
 Frog   202 VPRFAKSDLPMWKVPNPSTGETG-NNGLYAFGNARANESPFLQSLGILWFRYHNYKAQEFAKENP 265

  Fly   326 DHSDERIFQEARKINIAQFQKITYYDWLPLFVGRTYTYLNGLIYPVEPTEYVNDYDETVNPAAYA 390
            :.|||.:||.|||..||.:|.|.:|:|||.|:.|..|...|             |.:.|:|:...
 Frog   266 EWSDEVLFQHARKWVIAVYQNIVFYEWLPAFLSRNVTAYKG-------------YQQHVDPSISP 317

  Fly   391 EFSAAAFRYAHTQIPGWFSLVAPNRRSN------------RTMRLSDFLDRTETIRLLDTSDNFD 443
            .|:....:..:|.:|.  .:...|:..|            ..:||.:.....|...|.::|.. |
 Frog   318 VFTVQLSQMIYTMMPS--GIYMRNKDCNFQNVSGSNGSVWPALRLCNNYWNRENSNLKNSSST-D 379

  Fly   444 ALLRGLATQLHKRSDGNIDREIKHYFNRKEFEEYG------SDLKSIDIQRARDFGLASYNDVRE 502
            .:|.|:|:|:.::.|..:..::..|.       ||      :||.:..|..|||.||.:||.|.|
 Frog   380 EILMGMASQIAEKEDNILVNDLTDYC-------YGQIKYSRTDLFAASILHARDLGLPNYNKVCE 437

  Fly   503 FCGLRRAVDWADFAHEIPGEKISLLRRLYATPDDVELGVGGTLEYHVPDALFGPTLLC------- 560
            :.......:|.....:..|:|   |..||.  :|.|     .||       |.|.||.       
 Frog   438 YYQCPLLENWEKMTDKELGKK---LASLYG--NDTE-----KLE-------FIPGLLAEMAGNSI 485

  Fly   561 -----VIGKQFLNTRRGDRFFFERENEGGFSRAQLAEIRKVSLSSLFCSNANYLHLIQPNVF 617
                 ::.:||...|.||||:||....|.||:..:..||.:.|.::..:..:....||.|||
 Frog   486 NFFSDIVLEQFYRLRDGDRFWFENVKNGLFSKKDIDNIRNIKLQNVLVAVTDAGDTIQQNVF 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4009NP_001262655.1 An_peroxidase_like 77..>367 CDD:265428 94/300 (31%)
An_peroxidase 95..610 CDD:281139 155/566 (27%)
peroxinectin_like 228..605 CDD:188655 116/414 (28%)
duox2XP_017947900.2 dual_peroxidase_like 29..581 CDD:188652 160/572 (28%)
FRQ1 726..918 CDD:227455
PLN02292 1056..>1376 CDD:215165
NOX_Duox_like_FAD_NADP 1244..1517 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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