DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5225 and col-83

DIOPT Version :9

Sequence 1:NP_650587.1 Gene:CG5225 / 42053 FlyBaseID:FBgn0038468 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_496367.2 Gene:col-83 / 185221 WormBaseID:WBGene00000658 Length:346 Species:Caenorhabditis elegans


Alignment Length:305 Identity:89/305 - (29%)
Similarity:103/305 - (33%) Gaps:100/305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FWIGWAFGLANSKNPS---AETGRLIASLQA------APAPAPAQSVIYKLPPQHYYPPPPPPPP 63
            |::.:...:.|...||   .|||..|..:.:      ...|...|..:.:.|..|          
 Worm    93 FFMNYCNDVTNCGGPSDCGQETGCAIHPVHSCGGGGGCSQPVVVQQPVIQQPIVH---------- 147

  Fly    64 PPPQHCNCPPGPPGPPGPPGLPGTPGPQGPKGHTGSKGERGEKGERGHYGLP------------- 115
             .||...|..|||||||.|||.|..|..|.:|:.|..|.          .:|             
 Worm   148 -SPQQQFCIFGPPGPPGIPGLDGNDGDDGSEGYPGVPGA----------NVPDTVLPEIDDFCFD 201

  Fly   116 ------GQPGEPGPIGPPGLPGPPGHK-----SGHGHHDHHDHHHHHPAPPPPPPPPPPPPPPPP 169
                  |.||.|||.||.|.|||.|.|     ||                  ||.||.||.||..
 Worm   202 CPPARSGPPGPPGPKGPRGTPGPTGPKNFYITSG------------------PPGPPGPPGPPGN 248

  Fly   170 PPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHHHHHKGSKGPPGP---PGPPG--------- 222
            |....|......|.|:|         ...:|..|    ..|..|||||   |||.|         
 Worm   249 PGGIGPRGPPGDPGIMT---------QDSRGVEG----PSGPSGPPGPMGFPGPKGIDGFSQVGS 300

  Fly   223 TGPP---GPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPG 264
            .|||   |.||..|...|:.||....||.........|.|...||
 Worm   301 MGPPGNRGAPGRVGLNGPRGPPGDIGPPGSAGGCSACPIPRVSPG 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5225NP_650587.1 None
col-83NP_496367.2 Col_cuticle_N 22..72 CDD:198156
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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