DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5225 and COL4A1

DIOPT Version :10

Sequence 1:NP_650587.1 Gene:CG5225 / 42053 FlyBaseID:FBgn0038468 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001836.3 Gene:COL4A1 / 1282 HGNCID:2202 Length:1669 Species:Homo sapiens


Alignment Length:565 Identity:167/565 - (29%)
Similarity:188/565 - (33%) Gaps:201/565 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 YPPPPPPPPPP----------PQHCNCPPGPPGPPGPPGLPGTPGP--QGPKGHTG--------- 98
            :|..|..|.||          |.....||||||||||||..|..|.  |||||..|         
Human   177 FPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG 241

  Fly    99 --------------SKGERGEKGERGHYGLP-----GQPGEPGP------------IGPPGLPGP 132
                          :|||:|:|||.|..|:|     |:||:|||            .|.||.||.
Human   242 VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGE 306

  Fly   133 PGHKSGHGHHDHHDHHHHHPAPPPPPP-----------------PPPPPPPPPPPPHSHPH-SHH 179
            ||:....|..........  |.||.||                 |..|.|...|.|...|. ...
Human   307 PGYPGLIGRQGPQGEKGE--AGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQ 369

  Fly   180 PHPPIVTPPIIVPIPLPPQKGEHGH--HHHHKGSKGPPGP--PGPPG----TGPPGPPGPPGTT- 235
            |.||        .:|:|.|.|..|.  ....||.:|.||.  |||.|    .||||.|||||.. 
Human   370 PGPP--------GLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPG 426

  Fly   236 YP------QPPPPPPPPPPPPPSYP-----------------------Y--PPYPYPPPGPYPGP 269
            |.      ||.||....||..|..|                       |  ||.|..|||....|
Human   427 YTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFP 491

  Fly   270 WIP-------LP-------VPVPWPSKGHKGDKGHKG------------GHKGDKGGHHHHYYP- 307
            ..|       ||       ||.|..:.|..|..|.||            |.|||.|      :| 
Human   492 GQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPG------FPG 550

  Fly   308 ----------PGHDKGGYYPYP-PHGGHG-----GHHHP--GHNYPG-------PYPPPYPPHHP 347
                      ||.|  |:...| |.|..|     |...|  |..:||       |.||.|.|..|
Human   551 QPGMPGRAGSPGRD--GHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGP 613

  Fly   348 HDGGDKGYHHYP--PHNHGGHNHGGHNNHHPPHNGEHNHNHPPHNHGGHGHHHPSHNHGGQDPHN 410
            .  ||||...:|  |.:.|.....|......|..|      ||...|..|      :.|...|..
Human   614 I--GDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPG------PPGAEGLPG------SPGFPGPQG 664

  Fly   411 THPHTGTHGNGG-HSQTSHHQHPHHHQPKPTKPEG----SGEQTP 450
            .....||.|..| ..:......|....|.|..|:|    .|:..|
Human   665 DRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGP 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5225NP_650587.1 CobT2 <452..>562 CDD:443611
COL4A1NP_001836.3 gly_rich_SclB <42..>361 CDD:468478 59/185 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..459 96/291 (33%)
Triple-helical region 173..1440 167/565 (30%)
gly_rich_SclB <267..>577 CDD:468478 95/327 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..1382 60/228 (26%)
gly_rich_SclB <506..>766 CDD:468478 60/226 (27%)
gly_rich_SclB <777..>1047 CDD:468478
gly_rich_SclB <948..>1179 CDD:468478
gly_rich_SclB <1088..>1335 CDD:468478
gly_rich_SclB <1229..>1443 CDD:468478
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1404..1431
C4 1446..1553 CDD:460201
C4 1556..1667 CDD:460201
Blue background indicates that the domain is not in the aligned region.

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