DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8907 and eps8l1

DIOPT Version :9

Sequence 1:NP_001247146.1 Gene:CG8907 / 42050 FlyBaseID:FBgn0038466 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_004916293.1 Gene:eps8l1 / 100494819 XenbaseID:XB-GENE-991373 Length:751 Species:Xenopus tropicalis


Alignment Length:826 Identity:212/826 - (25%)
Similarity:340/826 - (41%) Gaps:214/826 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NGVPGGNQANGHYDEVK----------PTYALEHLATFKLKNEAEVKQPKEKMKLLVELEKTGGI 82
            |||...| |...|::.|          ..|.:.||.||.:..:.:|...::.::.|..::..|.|
 Frog     8 NGVSKPN-AKSIYEQRKKYSNVIMADVSQYQVHHLVTFTIGEDDDVHTVEDAIRKLNAVDSKGKI 71

  Fly    83 WPHKMFMSFNGQWLVMLDSDMK-EIENFPGSLITEPTAFISDHPQESFNNILIFSVPGISLGNTE 146
            |..:|.:..|...:.::|.:.| |:|.||.|.|......:   |:...:.:||...........:
 Frog    72 WIQEMLIEVNSSVVKLVDVNSKEELEEFPLSAIQRCDTVL---PERRNHPLLILVCQDTYQPKPD 133

  Fly   147 MHIFQVADVSSVLLVEDLKT-----------------------LSKG------------------ 170
            ::.||...|::.|:.||:.:                       :::|                  
 Frog   134 VYFFQSDYVAAHLIKEDINSAVSDFQSGVNAKRPEALRNNMEQIAQGAPGPNTFTPLGQWRQPTS 198

  Fly   171 ---TPVTV---DRNKTPILLP---------------------KPERPQN------------QQAK 196
               ||..:   :..:.|::.|                     .|:.||.            ||..
 Frog   199 QYVTPAEILEREAQRKPMVKPPRSSLTKIIVSSTDQGQQSIETPQYPQEPLYSEIKRHDKPQQFV 263

  Fly   197 DQYGI------AAAVAGIAA-EKNAIDKEQTERDVQVINHCFEDIERFMARLHYAAEALNELKLR 254
            .:.|.      ...|.|.|| :.:|:   ::..:|.::||||:|||.||..|..:|||...|..|
 Frog   264 QESGSPQLQQKTLKVPGEAATDPSAV---RSGHEVDLLNHCFDDIEFFMGSLQKSAEAFKMLNQR 325

  Fly   255 KEQHNPH----GEGLLVLRSRPPIESEFHDILAKAKLALIYSVRLQNQFTKPA--DPVHNVFISL 313
            |:.....    |||||.||::||...|:.|.:.|.|.......||:|....|:  :.||.:|..|
 Frog   326 KKSRRTKKKEAGEGLLTLRAKPPRIEEYEDAVRKFKYCFCLLARLRNNIVNPSAIELVHFLFGPL 390

  Fly   314 KSIVTVCNDIYVDAGLPQAVLNPLLRRETIAFLNGTLDSNEMQLWQSLGPNWTVPKDQF-KDHKS 377
            :::|..|..:    .:|..:..|||..|.:.||..:|:..|::||.|||||||.|:.:: |:...
 Frog   391 RTLVDSCGGV----EMPAEITTPLLTNEAVTFLKESLNEQELELWTSLGPNWTKPRLEYPKEFCQ 451

  Fly   378 SYHPIFYDDWSP------DWVVDEEVPYLAPALK--KSTTPSPVPVPMPPSPGLGNRTWLSRLES 434
            .|.|.|...|.|      .|....|:.:....|:  :|.....:|.|:|...|         .|.
 Frog   452 PYTPTFRSGWVPVSTNGKPWEDPIELQHRHEELRAQQSAPQVNIPAPIPAVNG---------HEE 507

  Fly   435 RNVKIAEVTFNKSATNDKELKVTKGEYLEIIDDSRNWWKARNSYGNIGYVPHTVLTPYNFEPGVN 499
            .:.|....|::..|.|..||.|..||.||:||||:.|||.:|.:|.|||||:.:|.||       
 Frog   508 TDAKRVSCTYDFVARNSSELSVLHGEVLEVIDDSKKWWKVQNRFGQIGYVPYNILAPY------- 565

  Fly   500 GRDTESLASMALTENGGEEAIPPPLYRNTMAMYTAPVEQPAANGKAMQRTFSMPNVPVPPPMPPP 564
               |.:.|:.| ..||.:::.|.                                 .||||.||.
 Frog   566 ---TATDANKA-NVNGSQQSSPS---------------------------------KVPPPKPPK 593

  Fly   565 SDSQTPTPSGTLKRN------------MAAAGALAAMRARNDCEADDQLYYMQGDVHDELRLLQQ 617
            .      ||..:.||            :...|.:..:.:.|     ::|.         |||...
 Frog   594 K------PSNGIARNSWDQSNGLNQEQITEQGKMERISSMN-----EELL---------LRLANG 638

  Fly   618 QRERRKDLEILKTPE--IFITQNSKPSEVEEWLRGKGFSDIIIKRLHTLSGEEIFALSPHTIESY 680
            :...:|:|.|.|.|:  |.:|..|.|:||..||:.|||:.:.:..|..|:|.::|:|......:.
 Frog   639 RTAPQKNLNIQKMPDTSIPLTDESSPAEVTAWLQAKGFNTLTVNSLGVLNGVQLFSLRKDEFRAV 703

  Fly   681 FGRRESRRLISQIVLQKNFCEYKTIRSSELSAKLARARQKADQSNG 726
            . ..|..|:.||:::||...| .:.:.|||.|.:.|.:::.| :||
 Frog   704 C-PEEGARVYSQVMVQKALLE-DSKKISELEAVMERQKKRVD-TNG 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8907NP_001247146.1 PTB_EPS8 43..175 CDD:269921 33/186 (18%)
SH3_Eps8 439..492 CDD:212698 25/52 (48%)
SAM_superfamily 635..699 CDD:301707 21/63 (33%)
eps8l1XP_004916293.1 PTB_EPS8 32..162 CDD:269921 29/132 (22%)
SH3_Eps8 513..565 CDD:212698 25/51 (49%)
SAM_EPS8-like 657..722 CDD:188939 21/65 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5627
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 280 1.000 Inparanoid score I2834
OMA 1 1.010 - - QHG47799
OrthoDB 1 1.010 - - D118943at33208
OrthoFinder 1 1.000 - - FOG0001461
OrthoInspector 1 1.000 - - otm49446
Panther 1 1.100 - - O PTHR12287
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1022
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

Return to query results.
Submit another query.