DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MEF2A and mef-2

DIOPT Version :10

Sequence 1:NP_001386957.1 Gene:MEF2A / 4205 HGNCID:6993 Length:543 Species:Homo sapiens
Sequence 2:NP_492441.1 Gene:mef-2 / 172732 WormBaseID:WBGene00003182 Length:340 Species:Caenorhabditis elegans


Alignment Length:477 Identity:163/477 - (34%)
Similarity:207/477 - (43%) Gaps:158/477 - (33%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKV 65
            |||||||||||.||||||||||||||||||||||||||||||||||:|||:||||||||||||||
 Worm     1 MGRKKIQITRIQDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIVFNSTNKLFQYASTDMDKV 65

Human    66 LLKYTEYNEPHESRTNSDIVETL-RKKGLNGCESPDADDYFEHSPLSEDRFSKLNEDSDFIFKRG 129
            ||||||||||||||||:||:|.| ||:|..|  ..::||                          
 Worm    66 LLKYTEYNEPHESRTNNDIMEALNRKEGNQG--GGNSDD-------------------------- 102

Human   130 PALNKKEHRGCDSPDPDTSYVL---TPHTEEKYKKINEEFDNMMRNHKIAPGLPPQNFSMSVTVP 191
                       :||.|.||.|:   .|.....:..          |:.:|......  :.:|...
 Worm   103 -----------ESPGPSTSPVIQITMPAVVNGHSS----------NNSVASAASAS--AAAVAAA 144

Human   192 VTSPNALSYTNPGSSLVSPSLAASSTLTD------SSMLSPPQTTLHRNVSPGAPQRPPSTGNAG 250
            ..:..|:..|:.|::..:.:|.||:....      .:::..|..|.|.|      ||       .
 Worm   145 AAAVAAVEGTSSGAAAAAAALQASNAQRHHNLNLYQNLIFNPNYTRHLN------QR-------N 196

Human   251 GMLSTTDLTVPNGAGSS----PVGNGFV--NSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLG 309
            ..||:|.: .|:.:.|.    |....|.  .||..|  |.|..|:.                   
 Worm   197 DPLSSTSV-APSSSSSKHLDFPPSTSFAYDTSRLHP--IAAADADC------------------- 239

Human   310 MNSRKPDLRVVIPPSSKGMMPPLNTQRISSSQATQ-PLATPVVSVTTPSLPPQGLVYSAMPTAYN 373
                  ||    .|||:...    .|.|.||...| |::.|..|::..|  ..|:        .|
 Worm   240 ------DL----VPSSRAAA----DQNIWSSALQQRPVSQPAPSISNSS--TNGI--------SN 280

Human   374 TDYSLTSADLSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISI 438
            ...||.|.::|:|.|.:   :|.||                          |.||....:.|..:
 Worm   281 GTSSLLSPNVSSLNGHS---VLDLG--------------------------GPNLPYKLDPNTYV 316

Human   439 KSEPISPP--RDRMTPSGFQQQ 458
            |.||.|||  |.|:|.....||
 Worm   317 KMEPHSPPEKRPRITTEWRPQQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEF2ANP_001386957.1 ARG80 1..280 CDD:227400 119/294 (40%)
MADS_MEF2_like 2..78 CDD:238165 72/75 (96%)
HJURP_C 141..198 CDD:463543 10/59 (17%)
mef-2NP_492441.1 MADS_MEF2_like 2..78 CDD:238165 72/75 (96%)

Return to query results.
Submit another query.