DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and GDS1

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_015000.3 Gene:GDS1 / 854537 SGDID:S000005882 Length:522 Species:Saccharomyces cerevisiae


Alignment Length:249 Identity:55/249 - (22%)
Similarity:85/249 - (34%) Gaps:76/249 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLTTIDANSSRDVNAELNRIPASKWLQYVETALDSVNRQKRLEDNLLGSDITVKNGSLSHAQLLD 82
            |||...|:.|::.|.:.|.:.        |...:|:...|:.:        |.|.|..:.:|.|.
Yeast   311 LLTPNSASKSKNNNKKRNYMD--------EDTNESMTEPKKTK--------TTKPGKQTKSQSLS 359

  Fly    83 TLPSLASKKDNKLALKILKS-------SLLVFN----------------SECLPNNIDGDKCRSY 124
            .|.:  .||.:..:|....|       |.|..|                |:.||.|......||.
Yeast   360 VLST--PKKGSSASLSTFASSKNISPDSSLSHNASSNTYVTAAAAAPRLSKLLPKNGFKKNSRSS 422

  Fly   125 LEQKPLPEGSSLRTECENSLKGNREGHYAFRRLLGSSHYRNGFYQMFPNSGRRETVPAAWSISKE 189
            .|...:.:..|.:|..|:|.:              ||.|         ||.....|.:|.:.|.|
Yeast   423 SELAAIHKVISTQTPIESSSE--------------SSQY---------NSSSSSPVNSAAASSAE 464

  Fly   190 LYEPDHIQISKQQTFESN-----SNLALPQWAQ-----FVEHDLSKPVSQSMSN 233
              ....|..|:....|||     |...:..|.:     |:.||:..|.|.::.:
Yeast   465 --SLSDINSSQDNGRESNPSSQESRNEVTNWMKIVRNGFLTHDIESPESITLDD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 21/93 (23%)
An_peroxidase_like 290..637 CDD:265428
GDS1NP_015000.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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