DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irc and TCM62

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_009600.2 Gene:TCM62 / 852332 SGDID:S000000248 Length:572 Species:Saccharomyces cerevisiae


Alignment Length:640 Identity:106/640 - (16%)
Similarity:191/640 - (29%) Gaps:305/640 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IDANSSRDVNAELNRIP-ASKWLQYVETALDSVNRQKRLED-------NLLGSDITVKNGSLSHA 78
            |...|..||:|.:.::. :|...|.::..|.::|.:...:|       |....::.|..|....|
Yeast   166 IIVKSQNDVDALVEQLTMSSSDSQSIKRVLKAINYELFSDDIVRVINGNKTYDEVDVSKGWKYPA 230

  Fly    79 QLLDT---------LPS---LASKKD-------------NKL------ALKILKSSLLVFNSECL 112
            .:||:         ||:   ::..||             ||:      |.|:.||.||:.|.:| 
Yeast   231 GILDSNEAYLRSLELPTKKLVSIDKDMLVLMYDGTLRDANKILPTITYARKLRKSVLLIVNGDC- 294

  Fly   113 PNNIDGDKCRSYLEQKPLPEGSSLRTECENSLKGNREGHYAFRRLLGSSHYRNGFYQMFPNSGRR 177
                               .|.:|.:...|:.:..||                       |:..|
Yeast   295 -------------------TGDALTSVTINNNRNKRE-----------------------NNESR 317

  Fly   178 ETVPAAWSISKELYEPDHIQISKQQTFESNSNLALPQWAQFVEHDLSKPVSQSMSNGAPIECCSR 242
            ..|               ::.||    ::|::||..:...|::. |..|             |..
Yeast   318 IVV---------------LKYSK----KANNDLAPQENLDFIKF-LRLP-------------CGY 349

  Fly   243 DQINLQPRHHHPACAPILYQPGGKYDVPSCLNYVRSALAVADCNFGGAEQLNQATGSLDLSQLYG 307
            |.|      :.|..:|:         |||.:        .||..:|..|.:...||.   :.|| 
Yeast   350 DSI------YSPEYSPL---------VPSKM--------CADKYYGSIESIKATTGE---AFLY- 387

  Fly   308 FTAAAERKLRVLEGGLLRSTPRGEFDNALLPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPF 372
                                  ...|...:|                             |..|.
Yeast   388 ----------------------NSIDAEAIP-----------------------------NKVPK 401

  Fly   373 SIL--IYTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVL------- 428
            |.|  ..|:.:..||::..:                        .||..|:..|..||       
Yeast   402 SFLQNTVTLSIGGHNEIEID------------------------RRRNAIDNCLNNVLCHGLAKG 442

  Fly   429 ---GQKMS--------SEIRRKQPNRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKN 482
               |..:|        :|::..:||...:|.....::|:     :||:|:               
Yeast   443 FIPGYGISLLKAIPGLNELKANEPNFMTKVGINAVLSAV-----ILPSEV--------------- 487

  Fly   483 NQYVFISKELPTKNLFELKEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGVVWHKDTKP 547
                                 .:|....|...::|:::...:|:::..| |.:|      .:::|
Yeast   488 ---------------------AFKNAYGYNYYEINSLIAGAINEKSFPM-AKFS------PNSEP 524

  Fly   548 THADILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVLDKLKTI 602
                     :...:|..|.|:.: ::||:..        .|.||  ::|....||
Yeast   525 ---------VNTVKDGNLEPWSK-MDSCLAG--------VETFI--ELLTSCNTI 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 71/472 (15%)
An_peroxidase_like 290..637 CDD:265428 49/333 (15%)
TCM62NP_009600.2 PTZ00114 124..492 CDD:185455 88/544 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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