DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irc and DOX1

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_186791.1 Gene:DOX1 / 821135 AraportID:AT3G01420 Length:639 Species:Arabidopsis thaliana


Alignment Length:529 Identity:104/529 - (19%)
Similarity:198/529 - (37%) Gaps:140/529 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 FRRLLGSSHYRNGFYQMFPNSGRRETVPAAWSISKELYEPDHIQIS-----KQQTFESNS--NLA 211
            |...:||   :|.|:      ||  ..|.....|| |..||.:.::     :::..::..  |:.
plant   101 FNEGVGS---QNSFF------GR--NCPPVDQKSK-LRRPDPMVVATKLLGRKKFIDTGKQFNMI 153

  Fly   212 LPQWAQFVEHDLSKPV--SQSMSNGAPIECCSRDQIN----LQPRHHHPACAPILYQPGGKYDVP 270
            ...|.||:.||....:  :..:...||.|..|:..::    |:.:.          .|.|.:::.
plant   154 AASWIQFMIHDWIDHLEDTHQIELVAPKEVASKCPLSSFRFLKTKE----------VPTGFFEIK 208

  Fly   271 SCLNYVRSALAVADCNFGGAEQLNQATGSLDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNA 335
            :                 |::  |..|...|.|.:||..:....::|..:.|.|:.:.    :..
plant   209 T-----------------GSQ--NIRTPWWDSSVIYGSNSKTLDRVRTYKDGKLKISE----ETG 250

  Fly   336 LLPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSD 400
            ||  ..|.:|.:.             :||.| ||......:..:|::.||.|...||..:....|
plant   251 LL--LHDEDGLAI-------------SGDIR-NSWAGVSALQALFIKEHNAVCDALKDEDDDLED 299

  Fly   401 EKLFQAAKAVNVDIYRRVVIEEWLPE-----------------VLGQKMSSEI------------ 436
            |.|::.|:.|...:..::...:|..:                 :||:|.....            
plant   300 EDLYRYARLVTSAVVAKIHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVV 364

  Fly   437 -RRKQPNRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYVFISKELPTKNLFEL 500
             .:|..|..:..|......::....|:||::|..|..|:|. ||.|:...:   :|:..::|...
plant   365 GMKKPQNHGVPYSLTEDFTSVYRMHSLLPDQLHILDIDDVP-GTNKSLPLI---QEISMRDLIGR 425

  Fly   501 KEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGV------VWHKD---------TKPTHA 550
            |.|.....:.:|     .::.|:.:|.        ||.:      :|.:|         .:|.|.
plant   426 KGEETMSHIGFT-----KLMVSMGHQA--------SGALELMNYPMWLRDIVPHDPNGQARPDHV 477

  Fly   551 DILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVLDKLKTIY-ASWADVDLIVG 614
            |:.|.:|.|.|:.. :|.|......:...|:..|:|...  ..:.::.|..:| ....::||:||
plant   478 DLAALEIYRDRERS-VPRYNEFRRSMFMIPITKWEDLTE--DEEAIEVLDDVYDGDVEELDLLVG 539

  Fly   615 GISENPVHG 623
            .::|..:.|
plant   540 LMAEKKIKG 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 104/529 (20%)
An_peroxidase_like 290..637 CDD:265428 77/380 (20%)
DOX1NP_186791.1 PLN02283 6..639 CDD:177921 104/529 (20%)
An_peroxidase 90..608 CDD:281139 104/529 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 107 1.000 Domainoid score I2172
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2076
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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