DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irc and Cybb

DIOPT Version :10

Sequence 1:NP_650584.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_076455.2 Gene:Cybb / 66021 RGDID:620574 Length:570 Species:Rattus norvegicus


Alignment Length:228 Identity:51/228 - (22%)
Similarity:84/228 - (36%) Gaps:79/228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 NRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYVFISKELPTKNLFELKEEIYK 506
            |..:..|:.::||            |.|:       |.::|.:|:..:           :|:|..
  Rat   128 NARVGTSDPYSVA------------LSNI-------GDKENEEYLNFA-----------REKIKN 162

  Fly   507 PK--LQYTSQKLNNI--------LESLLNQETMKMDAAYSGGVVWHKDTKPTHADILAFDIQRGR 561
            |:  |.....:|..|        |..::...|..:..:|. .|.|:     ||...:.|.|... 
  Rat   163 PEGGLYVAVTRLAGITGIVITLCLILIITSSTKTIRRSYF-EVFWY-----THHLFVIFFIGLA- 220

  Fly   562 DHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDV-LDKLKTIYASWADVDLIVGGISENPV---H 622
            .||       .|..|..:..:|.|  ||.:  || .||:|    .|       |.|.|.||   .
  Rat   221 IHG-------AERIVRGQTSDSLK--EHNL--DVCADKIK----EW-------GKIKECPVPKFA 263

  Fly   623 GSIGPTFSCIISEQFVHVLK------QNQQKAV 649
            |:...|:..|:...|:::.:      ::|||.|
  Rat   264 GNPPMTWKWIVGPMFLYLCERLVRFWRSQQKVV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_650584.1 An_peroxidase 151..682 CDD:460804 51/228 (22%)
CybbNP_076455.2 Ferric_reduct 65..220 CDD:426438 24/127 (19%)
PLN02844 <165..>423 CDD:215453 39/161 (24%)
NOX_Duox_like_FAD_NADP 297..570 CDD:99783 51/228 (22%)
NAD_binding_6 401..550 CDD:429792
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.