DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and Tpo

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_062226.2 Gene:Tpo / 54314 RGDID:3900 Length:914 Species:Rattus norvegicus


Alignment Length:788 Identity:193/788 - (24%)
Similarity:323/788 - (40%) Gaps:218/788 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SRDVNAELNRIPASKWLQYVETA---LDSV--NRQKRLEDNLLGSDITVKNGSLSHAQLL--DTL 84
            |||:..  .:...|..:..|||:   :|:.  |..||   ||      .|.|.||.||||  ..|
  Rat    26 SRDILG--GKTMTSHVINVVETSQLLVDNAVYNTMKR---NL------KKRGVLSPAQLLSFSKL 79

  Fly    85 PSLASKKDNKLALKILKSSLLV-------FNSECLP-------NNIDGDKCRSYLEQKPLPEGSS 135
            |...|...:: |.:|:::|:.|       |:::.|.       .|:.|  |..::          
  Rat    80 PESTSGAISR-AAEIMETSIQVMKREQSQFSTDALSADILATIANLSG--CLPFM---------- 131

  Fly   136 LRTECENSLKGNREGHYAFRRLLGSSH---------------------YRNGF-----------Y 168
            |...|.::...|:     :|.:.|..:                     |.:||           |
  Rat   132 LPPRCPDTCLANK-----YRPITGVCNNRDHPRWGASNTALARWLPPVYEDGFSQPRGWNPNFLY 191

  Fly   169 QMFPNSGRRETVPAAWSISKELYEPDHIQISKQQTFESNS-NLALPQWAQFVEHDLSKPVSQSMS 232
            ..||       :|....:::.|     ||:|.:...|.:. :..||.|.|:::||::. ..||.|
  Rat   192 HGFP-------LPPVREVTRHL-----IQVSNEAVTEDDQYSDFLPVWGQYIDHDIAL-TPQSTS 243

  Fly   233 NGA---PIECCSRDQINLQPRHHHPACAPILYQPGGKYDVPSCLNYVRSALAVADCNFG--GA-- 290
            ..|   .::|      .|...:.:| |.|| ..|.......:||.:.||:.|   |..|  ||  
  Rat   244 TAAFWGGVDC------QLTCENQNP-CFPI-QLPSNSSRTTACLPFYRSSAA---CGTGDQGALF 297

  Fly   291 ---------EQLNQATGSLDLSQLYGFTAAAERKLR--VLEGGLLR-STPRGEFDNALLPIATDT 343
                     :|:|..|..||.|.:||.:...|::||  ....|||| :|...:...|.||.|:..
  Rat   298 GNLSAANPRQQMNGLTSFLDASTVYGSSPGVEKQLRNWSSSAGLLRVNTLHLDSGRAYLPFASAA 362

  Fly   344 EGPSFCARATIGDGT-CFAAGDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDEKLFQAA 407
            ..|.  ..|...:.| ||.|||.|.:..|....::|:::|.||::|...|..|..||....:|.|
  Rat   363 CAPE--PGAPHANRTPCFLAGDGRASEVPALAAVHTLWLREHNRLATAFKAINTHWSANTAYQEA 425

  Fly   408 KAVNVDIYRRVVIEEWLPEVLG----QKMSSEIRRKQPNRALEVSNEFAVAAIRFYFSMLPNELL 468
            :.|...:::.:.:.:::|::||    ::.........|.....|||.|:.||.||..:.:...:.
  Rat   426 RKVVGALHQIITMRDYIPKILGPDAFRQYVGPYEGYNPTVNPTVSNVFSTAAFRFGHATVHPLVR 490

  Fly   469 NLTKDNVVYGTEKNNQYVFISKELPTKNLFELKEEIYKP---------------------KLQYT 512
            .|..|...:            .|||.   .:|.:..::|                     |||  
  Rat   491 RLNTDFQDH------------TELPR---LQLHDVFFRPWRLIQEGGLDPIVRGLLARPAKLQ-- 538

  Fly   513 SQKLNNILESLLNQE-TMKMDAAYSGGVVWHKDTKPTHADILAFDIQRGRDHGLLPYYRYLESCV 576
                  :.|.|:|:| |.::....:.|.:          |:.:.::||||||||..|..:.|.|.
  Rat   539 ------VQEQLMNEELTERLFVLSNVGTL----------DLASLNLQRGRDHGLPGYNEWREFCG 587

  Fly   577 LSR---PVESWKDFEHFIPSDVLDKLKTIYASWADVDLIVGGISENPVHGS-IGPTFSCIISEQF 637
            |||   |.|..|...:   ..:::|:..:|....::|:.:||::|..:.|: .||.|:|||.:|.
  Rat   588 LSRLETPAELNKAIAN---RSMVNKIMELYKHADNIDVWLGGLAEKFLPGARTGPLFACIIGKQM 649

  Fly   638 -------------VHVLKQNQQKAVQKHTELVEQYRHFNGTKLLCLNSGLSAVPQNIFQLPSARN 689
                         .||....|::.::||:.          .:::|.|:||:.||.:.|::.....
  Rat   650 KALRDGDRFWWENSHVFTDAQRQELEKHSL----------PRVICDNTGLTRVPVDAFRIGKFPQ 704

  Fly   690 QMVSCEDV 697
            ...|||::
  Rat   705 DFESCEEI 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 148/616 (24%)
An_peroxidase_like 290..637 CDD:265428 102/391 (26%)
TpoNP_062226.2 An_peroxidase 145..687 CDD:281139 148/613 (24%)
thyroid_peroxidase 161..722 CDD:188657 155/624 (25%)
CCP 730..783 CDD:153056
EGF_CA 784..826 CDD:284955
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 882..907
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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