DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and Ptgs2

DIOPT Version :10

Sequence 1:NP_650584.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_058928.3 Gene:Ptgs2 / 29527 RGDID:620349 Length:604 Species:Rattus norvegicus


Alignment Length:350 Identity:79/350 - (22%)
Similarity:137/350 - (39%) Gaps:66/350 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNALLPIATDTEGPSFCARATIGDGTCFAAGD 364
            :||:.:||.|...:.|||:.:.|.|:....|  .....|...||: ........:.:...||.|.
  Rat   214 VDLNHVYGETLDRQHKLRLFQDGKLKYQVIG--GEVYPPTVKDTQ-VDMIYPPHVPEHLRFAVGQ 275

  Fly   365 SRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLG 429
            ......|..::..||::|.||:|...|||.:|.|.||:|||.::.:.:....::|||:::..:.|
  Rat   276 EVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWDDERLFQTSRLILIGETIKIVIEDYVQHLSG 340

  Fly   430 Q----KMSSEIRRKQ----PNRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYV 486
            .    |...|:...|    .||   :::||  ..:..:..:||:                     
  Rat   341 YHFKLKFDPELLFNQQFQYQNR---IASEF--NTLYHWHPLLPD--------------------- 379

  Fly   487 FISKELPTKNLFELKEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGVVWHKDTKPTHAD 551
                   |.|: |.:|..:|..|...|..|.:.|...:...|.::....:||     ...|....
  Rat   380 -------TFNI-EDQEYTFKQFLYNNSILLEHGLAHFVESFTRQIAGRVAGG-----RNVPIAVQ 431

  Fly   552 ILA---FDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVLDKLKTIYASWADVDLIV 613
            .:|   .|..|...:..|..||...|.   :|..|:::...  ..::..:||.:|.....::|..
  Rat   432 AVAKASIDQSREMKYQSLNEYRKRFSL---KPYTSFEELTG--EKEMAAELKALYHDIDAMELYP 491

  Fly   614 GGISENP----VHG----SIGPTFS 630
            ..:.|.|    :.|    .:|..||
  Rat   492 ALLVEKPRPDAIFGETMVELGAPFS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_650584.1 An_peroxidase 151..682 CDD:460804 78/349 (22%)
Ptgs2NP_058928.3 EGF 21..53 CDD:394967
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 78/349 (22%)
Blue background indicates that the domain is not in the aligned region.

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