DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and Ptgs2

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_035328.2 Gene:Ptgs2 / 19225 MGIID:97798 Length:604 Species:Mus musculus


Alignment Length:327 Identity:76/327 - (23%)
Similarity:133/327 - (40%) Gaps:67/327 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNALLPIATDTEGPSFCARATIGDGTCFAAGD 364
            :||:.:||.|...:.|||:.:.|.|:....|  .....|...||: ........|.:...||.|.
Mouse   214 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIG--GEVYPPTVKDTQ-VEMIYPPHIPENLQFAVGQ 275

  Fly   365 SRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLG 429
            ......|..::..||::|.||:|...|||.:|.|.||:|||.::.:.:....::|||:::..:.|
Mouse   276 EVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSG 340

  Fly   430 Q----KMSSEIRRKQ----PNRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYV 486
            .    |...|:...|    .||   :::||  ..:..:..:||:..      |:     ::.:|.
Mouse   341 YHFKLKFDPELLFNQQFQYQNR---IASEF--NTLYHWHPLLPDTF------NI-----EDQEYS 389

  Fly   487 FISKELPTKNLFELKEEIYKPKLQYTSQKLNN--ILESLLNQETMKMDAAYSGGVVWHKDTKPTH 549
            |             |:.:|           ||  :||..|.|.........:|.|...::. |..
Mouse   390 F-------------KQFLY-----------NNSILLEHGLTQFVESFTRQIAGRVAGGRNV-PIA 429

  Fly   550 ADILA---FDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFI-PSDVLDKLKTIYASWADVD 610
            ...:|   .|..|...:..|..||...|      ::.:..||... ..::..:||.:|   :|:|
Mouse   430 VQAVAKASIDQSREMKYQSLNEYRKRFS------LKPYTSFEELTGEKEMAAELKALY---SDID 485

  Fly   611 LI 612
            ::
Mouse   486 VM 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 76/327 (23%)
An_peroxidase_like 290..637 CDD:265428 76/327 (23%)
Ptgs2NP_035328.2 EGF_CA 19..55 CDD:238011
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 76/327 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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