DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and Ptgs1

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_032995.1 Gene:Ptgs1 / 19224 MGIID:97797 Length:602 Species:Mus musculus


Alignment Length:419 Identity:86/419 - (20%)
Similarity:154/419 - (36%) Gaps:96/419 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNALLPIATDTEGPSFCARATIG--DGTCFAA 362
            :||..:||.....:..||:.:.|.|:..   ..|..:.|  ...|..|...|...|  .....|.
Mouse   230 VDLGHIYGDNLERQYHLRLFKDGKLKYQ---VLDGEVYP--PSVEQASVLMRYPPGVPPERQMAV 289

  Fly   363 GDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEV 427
            |.......|..:|..||::|.||:|...||:.:|.|.||:|||..:.:.:....::||||::..:
Mouse   290 GQEVFGLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGETIKIVIEEYVQHL 354

  Fly   428 LGQKMSSEIRRKQPNRA-LEVSNEFAVAAIRFY--FSMLPNELLNLTKDNVVYGTEKNNQYVFIS 489
            .|..:..:...:...|| .:..|..|:.....|  ..::||.                       
Mouse   355 SGYFLQLKFDPELLFRAQFQYRNRIAMEFNHLYHWHPLMPNS----------------------- 396

  Fly   490 KELPTKNLFEL--KEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGVVWHKDTKPTHADI 552
                    |::  :|..|:..|..||..::..:|:|::..:.:......||..:.........|:
Mouse   397 --------FQVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQRAGRIGGGRNFDYHVLHVAVDV 453

  Fly   553 LAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVLDKLKTIYASWADVD------- 610
                |:..|:..|.|:..|.:...| :|..|:::...  ..::..:|:.:|   .|:|       
Mouse   454 ----IKESREMRLQPFNEYRKRFGL-KPYTSFQELTG--EKEMAAELEELY---GDIDALEFYPG 508

  Fly   611 LIVGGISENPVHG----SIGPTFSCIISEQFVHVLKQNQQKAVQKHTELVEQY---RHFNG---- 664
            |::.....|.:.|    .:|..||.               |.:..:.....:|   ..|.|    
Mouse   509 LLLEKCQPNSIFGESMIEMGAPFSL---------------KGLLGNPICSPEYWKPSTFGGDVGF 558

  Fly   665 --------TKLLCLNSGLSAVPQNIFQLP 685
                    .||:|||:  ...|...|::|
Mouse   559 NLVNTASLKKLVCLNT--KTCPYVSFRVP 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 82/404 (20%)
An_peroxidase_like 290..637 CDD:265428 74/354 (21%)
Ptgs1NP_032995.1 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 83/410 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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