DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irc and pxn-1

DIOPT Version :10

Sequence 1:NP_650584.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_505188.3 Gene:pxn-1 / 191484 WormBaseID:WBGene00004256 Length:1285 Species:Caenorhabditis elegans


Alignment Length:787 Identity:197/787 - (25%)
Similarity:310/787 - (39%) Gaps:156/787 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YICLLAFIIGA----SLLTTIDANSSR----DVNAELNRIPASKWLQYVETALDSVNRQKRLEDN 62
            |.|:....:||    :.||.|...:.:    .::.||.|..|.|..|.||.|::...:|      
 Worm   477 YSCMAGNPVGAMSADAKLTVIGGETRKAAAPQIDEELLRAIAQKARQNVENAVEKTRKQ------ 535

  Fly    63 LLGSDITVKNGSLSHAQLLDTLPSLA---SK------KDNKLALKILKSSLLVFNSECLPNNIDG 118
             |..|.......|.......| |..|   ||      :..:|..:.::..|::...|..|.|:..
 Worm   536 -LTQDKVTNTNDLKRLFRFST-PKQAVELSKAREIYEESVRLVREHVEKGLILNVDELHPKNVSY 598

  Fly   119 DK---------------CRSYLEQKPLPEG------SSLRTECENSLKG-NREGHYAFRRLLGSS 161
            :.               |.:...:.|..:.      .|...:|.|..|. ........|||| ..
 Worm   599 ESVLHVTHVQALMGLSGCHTGQYKNPCTDTCFHHRYRSFDGQCNNKNKPMTGVSLMPLRRLL-KP 662

  Fly   162 HYRNGFYQMFPNSGRRETVPAAWSISKELYE----PDHIQISKQ----QTFESNSNLA--LPQWA 216
            .|.|||           ..|..|...: ||.    |:..::|:|    :....:|.|:  :.||.
 Worm   663 VYENGF-----------NTPVGWEKGR-LYNGYPLPNVREVSRQLVATENITPHSKLSSMVMQWG 715

  Fly   217 QFVEHDLSKPVS----QSMSNGAPIECCSRDQINLQPRHHHPACA--PILYQPGGKYDVPSCLNY 275
            |||:|||:..|:    .|.:.||   .|:|...||.|..:.|...  |.:.....||   .|:.:
 Worm   716 QFVDHDLTHTVTALSRHSYATGA---FCNRTCENLDPCFNIPLSPNDPRVKSGSAKY---PCIEF 774

  Fly   276 VRSALAVADCNFGGA----------EQLNQATGSLDLSQLYGFTAAAERKLR--VLEGGLLRSTP 328
            .|||   |.|..|..          ||:|..|..||.|.:||......::||  ....|:||...
 Worm   775 ERSA---AVCGSGETSLVFNRVTYREQMNALTSFLDASNVYGSNEVQAQELRDTYNNNGMLRFDI 836

  Fly   329 RGEFDNALLPIATDTEGPSFCARATIGDG--TCFAAGDSRVNSSPFSILIYTIFMRNHNKVAAEL 391
            ..|.....||...|:.  ..|.|....:.  .||.|||.|.|........:|||:|.||::|.:|
 Worm   837 TSEAGKEYLPFEKDSN--MDCRRNFSEENPIRCFLAGDLRANEQLALAATHTIFIREHNRIAKKL 899

  Fly   392 KQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLG-----QKMSSEIRRKQPNRALEVSNEF 451
            |..|..|..|.::...:.:...:.:.:..:.|:|.:.|     .|.....:...|:....|:|.|
 Worm   900 KSMNGNWDGEIIYHETRKIVGAMMQHITYKHWMPIIFGGQAQMNKFVGTYQGYDPDVDASVTNAF 964

  Fly   452 AVAAIRFYFSMLPNELLNLTKDNVVYGTEKNNQYVFISKELPTK-NLFELKEEIYKPKLQYTSQK 515
            |.||.||..:::...|..|..|                 .:|.| ....|.:..:.|:|..|...
 Worm   965 ATAAFRFGHTIINPSLFRLGND-----------------FMPIKEGHIALHKAFFTPELVLTQGG 1012

  Fly   516 LNNILE-------------SLLNQETMKMDAAYSGGVVWHKDTKPTHADILAFDIQRGRDHGLLP 567
            ::.:|.             .|||.|.  ::..:..|   |:    ...|:...:|||.|||||..
 Worm  1013 VDPLLRGLFASPLKHPMPTQLLNMEL--IEKLFMKG---HE----VSLDLAVMNIQRSRDHGLPS 1068

  Fly   568 YYRYLESCVLSRPVESWKDFEHFIPSD-VLDKLKTIYASWADVDLIVGGISENPV-HGSIGPTFS 630
            |..|.:.|.|..||: |:|.:.:|..| ::.||:.:|....::||.||||.|..: :|..||||:
 Worm  1069 YTEYRKFCNLPVPVQ-WEDMKGYIKDDMIIQKLRGLYGVPQNIDLWVGGIVEEKLENGLFGPTFA 1132

  Fly   631 CIISEQFVHVLKQNQQKAVQKH----TELVEQYRHFNGTKLLCLN-SGLSAVPQNIFQLPSA-RN 689
            |||.||| ..::...:...:|.    .|.:.:.:.....:|.|.| ..:..:.:::|..|.. :.
 Worm  1133 CIIGEQF-RKIRDGDRFWYEKDGVFTPEQLREIKKITLARLFCDNGDNIDRIQKDVFMYPGMDKE 1196

  Fly   690 QMVSCED 696
            ...:|::
 Worm  1197 NYGTCQE 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_650584.1 An_peroxidase 151..682 CDD:460804 158/586 (27%)
pxn-1NP_505188.3 LRR <35..>174 CDD:443914
leucine-rich repeat 35..53 CDD:275380
leucine-rich repeat 54..77 CDD:275380
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..117 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
PCC 153..>267 CDD:188093
I-set 315..400 CDD:400151
Ig strand B 332..336 CDD:409353
Ig strand C 345..349 CDD:409353
Ig strand E 368..372 CDD:409353
Ig strand F 382..387 CDD:409353
Ig strand G 395..398 CDD:409353
IG_like 414..496 CDD:214653 5/18 (28%)
Ig strand B 425..429 CDD:409353
Ig strand C 438..442 CDD:409353
Ig strand E 461..466 CDD:409353
Ig strand F 476..481 CDD:409353 2/3 (67%)
Ig strand G 489..492 CDD:409353 0/2 (0%)
peroxidasin_like 757..1203 CDD:188658 126/481 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.