DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and skpo-3

DIOPT Version :10

Sequence 1:NP_650584.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_495511.1 Gene:skpo-3 / 174191 WormBaseID:WBGene00017968 Length:1000 Species:Caenorhabditis elegans


Alignment Length:605 Identity:149/605 - (24%)
Similarity:250/605 - (41%) Gaps:114/605 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 ECENSLKGNREGHYAFRRLLGSSHYRNG----------FYQMFPNSGRRETVPAAWSISKELYEP 193
            :||.::..|.    .||.|.|:.:...|          :.::.|.....|......|:..:. .|
 Worm   453 DCEANICYNA----MFRTLDGTCNNMKGEPLRGASYRPYTRLLPTIYDNEVSEPVGSLFTDA-RP 512

  Fly   194 DHIQISKQQTFESNS------NLALPQWAQFVEHDLSKPVSQSMSNGAPIECCSRDQINLQPRHH 252
            ...:|:::.|....|      |..:.|:.||:.||::|      :...|...|:..| |:..|  
 Worm   513 SPREITRRLTSSQASVESPDYNALIMQFGQFISHDMAK------TTLVPSSKCNVCQ-NITSR-- 568

  Fly   253 HPAC--APILY-QPGGKYDVPSCLNYVRSALAVADCNFGGAEQLNQATGSLDLSQLYGFTAAAER 314
               |  .||.: .....:....|:...||:......|....:|||:.||.:|.|.:||.:....:
 Worm   569 ---CMSVPITFDDSNANFRQAQCIRVSRSSPICGSGNLKPRQQLNENTGYIDASPIYGSSVHDSK 630

  Fly   315 KLRVLEGGLLRSTPRGEFDNALLPIATDTEGPSFCARATIGDGTC---FAAGDSRVNSSPFSILI 376
            |.|....|.|:           ||:........|........|.|   |.|||||||........
 Worm   631 KFRDGNSGFLK-----------LPMFNGKAFLPFDQNKCRNRGQCSVIFTAGDSRVNLFVGLSAW 684

  Fly   377 YTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLGQKMSS---EIRR 438
            :|||...||::....|:.||.|..|:|:|.|:.:.....:.:|..||||:|||...::   :.|.
 Worm   685 HTIFTEEHNRLVTAFKRLNPHWDGERLYQEARKMIGAQVQAIVYREWLPKVLGASFATVVGDYRG 749

  Fly   439 KQPNRALEVSNEFAVAAIRF-------YFSMLPNELLNLTKDNVVYGTEKNNQYVFISK---ELP 493
            ...:....|:|||..||.||       ::..|.|...|::...:.:.....:..|.:::   :..
 Worm   750 YDSDVDSTVANEFTSAAFRFGHGMIQEFYQRLDNSFRNISFGALPFQKGTLHSDVLVNEGGVDPL 814

  Fly   494 TKNLFELKEEIYKPKLQYTSQKLNNILESLLNQETMKMDAAYSGGVVWHKDTKPTHADILAFDIQ 558
            .:.:|  .:.:.:|: :.|:....|:..|                           .|:...:||
 Worm   815 IRGMF--SQNVKRPQ-RVTTTVTENMFGS---------------------------TDLSTINIQ 849

  Fly   559 RGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDVL-----DKLKTIYASWADVDLIVGGISE 618
            ||||||...|.:|.|.|.:....    :||| :..::|     :||:.||.|...:||.||.:.|
 Worm   850 RGRDHGHPAYVKYRELCGMGTAF----NFEH-LSREILNTGTRNKLQEIYGSVDKIDLWVGALLE 909

  Fly   619 NP-VHGSIGPTFSCIISEQFVHVLKQN----QQKAVQKHTELVEQYRHFNGTKLLCLNSG-LSAV 677
            :| :.|.:|||.:|||..||......:    :...|....:||| .|..:.::::|.|:. :|.:
 Worm   910 DPIIRGLVGPTVACIIGPQFKRTRDGDRFYYENPGVFSRRQLVE-IRKSSLSRIICDNTNTISTI 973

  Fly   678 PQNIFQLPSARNQMVSCEDV 697
            |:..|::    ..||.|..:
 Worm   974 PREAFRV----GHMVPCSQI 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_650584.1 An_peroxidase 151..682 CDD:460804 142/576 (25%)
skpo-3NP_495511.1 ShKT 41..75 CDD:214586
An_peroxidase 464..978 CDD:460804 142/573 (25%)
Blue background indicates that the domain is not in the aligned region.

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