DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and skpo-2

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_494540.1 Gene:skpo-2 / 173686 WormBaseID:WBGene00015841 Length:729 Species:Caenorhabditis elegans


Alignment Length:645 Identity:161/645 - (24%)
Similarity:273/645 - (42%) Gaps:142/645 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LALKILKSSLLVFNSECLPN----NIDGDKC-----RSYLEQKPLPEGSSLRTECENSLKGNREG 150
            |:::.::.|...||  |.|.    |.:.:.|     ||:       :|:     | |:||....|
 Worm   171 LSIRDVRDSNANFN--CAPTQETPNCNRNLCYHLRYRSF-------DGT-----C-NNLKKPMIG 220

  Fly   151 HYAFRRL--LGSSHYRNGFYQMFPNSGRRETVPAAWSISKELYEPDHIQISKQQTFESNSNLALP 213
            . ||..|  |.:..|.||...  |.|....:.|:|...|:.|       :|.....:.:||..|.
 Worm   221 S-AFTALMRLKNPMYDNGLNA--PTSSFLRSRPSARDASRLL-------LSSSTQIQHHSNALLM 275

  Fly   214 QWAQFVEHDLSKPVSQSMSNGAPIECCSRDQINLQPRHHHPACAPILYQPG----GKYDVPSCLN 274
            ||.||:.|||||   .:|.|......|:.::         ..|..:.....    |::   .||.
 Worm   276 QWGQFIAHDLSK---TTMLNNQECAACTSNK---------GRCTSVFLSRSDPTFGRF---MCLP 325

  Fly   275 YVRSALAVADCNFGGA---EQLNQATGSLDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNAL 336
            ..||...   |..|.:   ||.|:.|..:|.|.:||.:...:...|  :|..|::.   ..:|.:
 Worm   326 VARSTPV---CGTGVSNFREQFNENTAFIDGSMIYGSSDRDQFLFR--QGAFLKTK---LINNRV 382

  Fly   337 LPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDE 401
            .|              .:.......|||.|.|.......::.:::|.||::||.|::.||.|..|
 Worm   383 FP--------------PVDKNNNVVAGDDRANIFVGLASLHVLYLRQHNRIAATLQRVNPHWDQE 433

  Fly   402 KLFQAAKAVNVDIYRRVVIEEWLPEVLGQKMSSEIRR---KQPNRALEVSNEFAVAAIRFYFSML 463
            ::|..::.:...:.:|:...|:||:|||......|..   ..||....|:|||...|.||...|:
 Worm   434 RVFHESRKIVGAMIQRITFTEYLPKVLGVAFEERIGAYPGYDPNIDPSVANEFTSCAFRFGHGMI 498

  Fly   464 PNELLNLTKDNVVYGTEKNNQYVFISKELPTKNLFELKEEIYKPKLQYTSQKLNNILESLLN--- 525
                              ...|.|::::..........:.::|     ::..|||.::.|:.   
 Worm   499 ------------------QEFYPFLNEKFQHVGGIPFNDGMFK-----STHILNNGIDPLIRGLM 540

  Fly   526 ----QETMKMDAAYSGGVVWHKDTKPTHADILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKD 586
                :...::..|.:..:.       .::|:.:.:||||||||:.||..:.:.|.|...    ||
 Worm   541 TLPAKMPQRLTPAVTERIF-------GNSDLGSINIQRGRDHGVPPYTVWRKFCGLPEV----KD 594

  Fly   587 FE---HFIPSD-VLDKLKTIYASWADVDLIVGGISENPVHGS-IGPTFSCIISEQFVHVLKQNQQ 646
            ||   ..|.:. |:|.||.:|.....:|:.||.:.|:||..: :|||.||||.|||...  :|..
 Worm   595 FEGLKQVISNQVVIDNLKVVYKHVDAIDMYVGSLLEDPVKDALVGPTLSCIIGEQFKRT--RNGD 657

  Fly   647 KAVQKHT-----ELVEQYRHFNGTKLLCLNSG--LSAVPQNIFQL--PSARNQMVSCEDV 697
            :...:::     |.:.|.:....:::|| ::|  ...||:..|.:  |:|.| :|.|:::
 Worm   658 RLWYENSKVFSPEQLLQIKKITMSRVLC-DAGEHFPMVPRKAFSVFKPTAHN-LVKCDEI 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 136/549 (25%)
An_peroxidase_like 290..637 CDD:265428 92/364 (25%)
skpo-2NP_494540.1 ShKT 61..95 CDD:214586
ShKT 101..135 CDD:214586
An_peroxidase 204..690 CDD:281139 145/582 (25%)
peroxinectin_like 341..687 CDD:188655 99/401 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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