DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and skpo-2

DIOPT Version :10

Sequence 1:NP_650584.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:NP_494540.1 Gene:skpo-2 / 173686 WormBaseID:WBGene00015841 Length:729 Species:Caenorhabditis elegans


Alignment Length:645 Identity:161/645 - (24%)
Similarity:273/645 - (42%) Gaps:142/645 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LALKILKSSLLVFNSECLPN----NIDGDKC-----RSYLEQKPLPEGSSLRTECENSLKGNREG 150
            |:::.::.|...||  |.|.    |.:.:.|     ||:       :|:     | |:||....|
 Worm   171 LSIRDVRDSNANFN--CAPTQETPNCNRNLCYHLRYRSF-------DGT-----C-NNLKKPMIG 220

  Fly   151 HYAFRRL--LGSSHYRNGFYQMFPNSGRRETVPAAWSISKELYEPDHIQISKQQTFESNSNLALP 213
            . ||..|  |.:..|.||...  |.|....:.|:|...|:.|       :|.....:.:||..|.
 Worm   221 S-AFTALMRLKNPMYDNGLNA--PTSSFLRSRPSARDASRLL-------LSSSTQIQHHSNALLM 275

  Fly   214 QWAQFVEHDLSKPVSQSMSNGAPIECCSRDQINLQPRHHHPACAPILYQPG----GKYDVPSCLN 274
            ||.||:.|||||   .:|.|......|:.::         ..|..:.....    |::   .||.
 Worm   276 QWGQFIAHDLSK---TTMLNNQECAACTSNK---------GRCTSVFLSRSDPTFGRF---MCLP 325

  Fly   275 YVRSALAVADCNFGGA---EQLNQATGSLDLSQLYGFTAAAERKLRVLEGGLLRSTPRGEFDNAL 336
            ..||...   |..|.:   ||.|:.|..:|.|.:||.:...:...|  :|..|::.   ..:|.:
 Worm   326 VARSTPV---CGTGVSNFREQFNENTAFIDGSMIYGSSDRDQFLFR--QGAFLKTK---LINNRV 382

  Fly   337 LPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDE 401
            .|              .:.......|||.|.|.......::.:::|.||::||.|::.||.|..|
 Worm   383 FP--------------PVDKNNNVVAGDDRANIFVGLASLHVLYLRQHNRIAATLQRVNPHWDQE 433

  Fly   402 KLFQAAKAVNVDIYRRVVIEEWLPEVLGQKMSSEIRR---KQPNRALEVSNEFAVAAIRFYFSML 463
            ::|..::.:...:.:|:...|:||:|||......|..   ..||....|:|||...|.||...|:
 Worm   434 RVFHESRKIVGAMIQRITFTEYLPKVLGVAFEERIGAYPGYDPNIDPSVANEFTSCAFRFGHGMI 498

  Fly   464 PNELLNLTKDNVVYGTEKNNQYVFISKELPTKNLFELKEEIYKPKLQYTSQKLNNILESLLN--- 525
                              ...|.|::::..........:.::|     ::..|||.::.|:.   
 Worm   499 ------------------QEFYPFLNEKFQHVGGIPFNDGMFK-----STHILNNGIDPLIRGLM 540

  Fly   526 ----QETMKMDAAYSGGVVWHKDTKPTHADILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKD 586
                :...::..|.:..:.       .::|:.:.:||||||||:.||..:.:.|.|...    ||
 Worm   541 TLPAKMPQRLTPAVTERIF-------GNSDLGSINIQRGRDHGVPPYTVWRKFCGLPEV----KD 594

  Fly   587 FE---HFIPSD-VLDKLKTIYASWADVDLIVGGISENPVHGS-IGPTFSCIISEQFVHVLKQNQQ 646
            ||   ..|.:. |:|.||.:|.....:|:.||.:.|:||..: :|||.||||.|||...  :|..
 Worm   595 FEGLKQVISNQVVIDNLKVVYKHVDAIDMYVGSLLEDPVKDALVGPTLSCIIGEQFKRT--RNGD 657

  Fly   647 KAVQKHT-----ELVEQYRHFNGTKLLCLNSG--LSAVPQNIFQL--PSARNQMVSCEDV 697
            :...:::     |.:.|.:....:::|| ::|  ...||:..|.:  |:|.| :|.|:::
 Worm   658 RLWYENSKVFSPEQLLQIKKITMSRVLC-DAGEHFPMVPRKAFSVFKPTAHN-LVKCDEI 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_650584.1 An_peroxidase 151..682 CDD:460804 139/561 (25%)
skpo-2NP_494540.1 ShKT 61..95 CDD:214586
ShKT 101..135 CDD:214586
An_peroxidase 204..699 CDD:460804 147/591 (25%)
Blue background indicates that the domain is not in the aligned region.

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