DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irc and tpo

DIOPT Version :9

Sequence 1:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster
Sequence 2:XP_031758614.1 Gene:tpo / 100036738 XenbaseID:XB-GENE-920152 Length:872 Species:Xenopus tropicalis


Alignment Length:710 Identity:176/710 - (24%)
Similarity:300/710 - (42%) Gaps:191/710 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VFNSECLP------NNIDGDKCRSYLEQKPLPE-----GSSLR------TEC----------ENS 143
            ||:.:.:|      |:...||  :.|||.|..|     |||..      |.|          .|.
 Frog    33 VFHLDNIPQSALPRNSSQTDK--TSLEQHPESEDVSHTGSSFEAVLANLTGCVPQTLSPFCPNNC 95

  Fly   144 LKGNREGHYAFRRLLGSSHYRNGFYQMFPNSGRRETVPAAWSISKELYEPDHIQISK--QQTFES 206
            |.|.      :|.:.|:.:.||.     |..|...|:.|.|..::  || |.|...|  ::.|..
 Frog    96 LAGK------YRHITGACNNRNN-----PAWGAANTLLARWLPAQ--YE-DGIGEPKGWREEFLY 146

  Fly   207 NSNLALPQ----------------------------WAQFVEHDLS---KPVSQSMSNGAPIECC 240
            | ...|||                            |.|:::||::   :.||::.:.|: ::|.
 Frog   147 N-GFRLPQVREVTNKIIHASSKAFREDDLYSHIIIEWGQYIDHDIAFTPQSVSKTPAIGS-VDCK 209

  Fly   241 SRDQINLQPRHHHPACAPILYQPGGKYDVPSCLNYVRSALAV----ADCNFGG------AEQLNQ 295
            |..: ||.|      |.||............|:.:.||:.|.    ....||.      .||:|.
 Frog   210 STCE-NLYP------CYPIKLSEEDPLSQGGCIPFYRSSSACGTGRGGLKFGNPSLLNPREQING 267

  Fly   296 ATGSLDLSQLYGFTAAAERKLRVL--EGGLLR-STPRGEFDNALLPIATDTEGPSFCARATIGDG 357
            .|..:|.|.:||.:.:.:.||:.|  |.|||| :....:.....||..|    ||.|.:....|.
 Frog   268 LTSFIDASTVYGSSESLQHKLKNLSSEEGLLRVNVKYSDSSREYLPFET----PSACMQDPTADN 328

  Fly   358 T----CFAAGDSRVNSSPFSILIYTIFMRNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRV 418
            .    ||.||:.|.|.......::|:::|.||::|..||:.||.|:.|..:|.|:.:...:::.:
 Frog   329 AERIDCFFAGEGRANEVITLAAVHTLWLREHNRIAKALKKLNPHWNSETTYQEARKIVGALHQII 393

  Fly   419 VIEEWLPEVLGQKMSSEI--------RRKQPNRALEVSNEFAVAAIRFYFSMLPNELLNLTKDNV 475
            ...:::|::||:....:.        ::..|:    :||.|..||.||..:.:|..:..|     
 Frog   394 TFRDYMPKILGKAAYDQYIGLYKGYNQKTNPS----ISNIFTTAAFRFGHATIPPMVHRL----- 449

  Fly   476 VYGTEKNNQYVFISK--ELPTKNLF-----ELKEEIYKPKLQ---YTSQKLNNILESLLNQETMK 530
                  |:|||...|  .||...:|     .:||....|.::   ..|.||...::.:..:.|.|
 Frog   450 ------NSQYVDDPKYPSLPLNEVFFRPWRIVKEGGLDPLIRGLLGKSAKLQTQVDMINEELTEK 508

  Fly   531 MDAAYSGGVVWHKDTKPTHADILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFIPSDV 595
            :....:.|.:          |:.:.::||||||||..|..:.|.|.|||..         .|:|:
 Frog   509 LLVMTNNGSM----------DLASLNLQRGRDHGLPGYNDWREFCGLSRLA---------TPADL 554

  Fly   596 LD---------KLKTIYASWADVDLIVGGISENPVHGS-IGPTFSCIISEQFV------------ 638
            ::         |:..:|:...::|:.:||::|:.:.|: .||.|:|:|.:|..            
 Frog   555 INAVSDQKLVAKMIALYSHPDNIDVWLGGLAEDFLPGARTGPLFACLIGKQMQALREGDRFWYEN 619

  Fly   639 -HVLKQNQQKAVQKHTELVEQYRHFNGTKLLCLNSGLSAVPQNIFQLPSARNQMVSCEDV 697
             ::..:.|:..::||:.          ::::|.|:|||.||.:.|.|.:..:..|||:.:
 Frog   620 NNIFTKIQRSELEKHSL----------SRVICDNTGLSHVPLDAFLLGNYPDNFVSCDSI 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 146/611 (24%)
An_peroxidase_like 290..637 CDD:265428 101/381 (27%)
tpoXP_031758614.1 thyroid_peroxidase 116..679 CDD:188657 152/614 (25%)
CCP 687..736 CDD:153056
EGF_CA 738..781 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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