Protein Alignment Sf3a1 and AT5G12280

DIOPT Version :10

• Sequence 1: NP_650583.1
• Gene: Sf3a1 / 42048
• FlyBaseID: FBgn0266917
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_568261.1
• Gene: AT5G12280 / 831103
• AraportID: AT5G12280
• Length: 419
• Species: Arabidopsis thaliana
• Alignment Length: 770
• Identity: 128/770 - (16%)
• Similarity: 183/770 - (23%)
• Gaps: 436/770 - (56%)

  Fly    10 EEQFGNDQPKSMSGPIIGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNGGD 74
            |:...|:.|..          ||.|:|..:||.|..|||.|...|.:|.
plant    78 EKDNSNEAPAE----------PPREMRIHMDKIARVVARKGLRIERKIM---------------- 116

  Fly    75 PYHAYYRHKVNEFREGN-DAGITALASMKQLAVTSAAQQRQQELLK---QVVEQQFVPKEPPPEF 135
                    .|:|:...| |.|              |.:......||   |...:.|:..:|.|:|
plant   117 --------NVSEYLAKNQDEG--------------AQEPEAPATLKGDAQHYRRPFLLSDPAPKF 159

  Fly   136 EFIADPPSISALDLDIVKLTAQFVARNGRQFLTNLMSREQRNFQFDFLRPQHSLFQYFTKLLEQY 200
            .....|...:..|:|.:.||||.|.|.|.:|..:|:.......||:||:|..|.|.||.:|....
plant   160 PDYVLPEGYTIEDVDTIFLTAQIVGRYGEEFWLDLIKEVDNKPQFEFLKPADSKFDYFNRLSVVA 224

  Fly   201 TKVLIPPKDLLGKLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREEEKIERERVAYAQIDW 265
            ::         |..|||.... |.|..|.:...|..          ||:.||.|.
plant   225 SE---------GLKRSEKLTS-SRMAIVSKAFFYHL----------RRQNEKREL---------- 259

  Fly   266 HDFVVVETVDYQPFESGNFPPPTNPDEVGARVLMEERLMDEEGDTEMQIESDDEGDSQANNLLDS 330
                                                              :..||.::|..|..:
plant   260 --------------------------------------------------THKEGAAKACTLFGA 274

  Fly   331 GLKLSQMENRVGIQMKNVSSYGQPTGPKRDNTQVQDMDEASSDEDTPTTKLQPSVAPMLPPTHDK 395
                                                              |...|.|
plant   275 --------------------------------------------------LYAFVGP-------- 281

  Fly   396 VVVKKYDPKATQPKQAPMPTDEYLISPITGEKIPASKVSEHMRIGLLDPRWVEQRDKHTVEKINQ 460
                                                                             
plant   282 ----------------------------------------------------------------- 281

  Fly   461 DNVFAAGTAIEASLKQLAERRTDIFGVGDEETVIGKKLGEEETKKDDRVTWDGHTSSVEAATRAA 525
            |..||                 ||                    ||:.:....|.|:::
plant   282 DGCFA-----------------DI--------------------KDEDLPLLQHPSAIK------ 303

  Fly   526 RANITLEEQIHQIHKVKGLLPDEEKEKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQHHQGGGG 590
              ||
plant   304 --NI------------------------------------------------------------- 305

  Fly   591 GHHGHHNPHHHHPPHQQAPPHQSHHHHPPQQPQPVMQLMQLRPTMMQPPFGAGGGGYMNMQPGGI 655
                                                 |.:|:|.|  ||.|.
plant   306 -------------------------------------LTKLQPRM--PPLGG------------- 318

  Fly   656 PQQIAPAPPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSPVTIQVLVPNSDKSEWKLNGQMIAV 720
                         |.|.|.   ..|..|:||..|:|.|....||.|.||:.|  :||    ::.:
plant   319 -------------ESEEPE---FDESVLVPEDQFLAQHPGSSTIMVSVPDPD--DWK----VVKI 361

  Fly   721 TM-ALSEPIANLKTKLQDETGMPPAKQKIFYEGMFFKDSNTMAFYNLVNGTTVHL 774
            |: :|||.:|:||.|:..|...|..|||:..:..|.||:.::|.||:..|..:.|
plant   362 TVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEILTL 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sf3a1	NP_650583.1	SWAP	36..89	CDD:197818	12/52 (23%)
		Surp	150..200	CDD:460339	20/49 (41%)
		PRP21_like_P	228..480	CDD:403444	17/251 (7%)
		Ubl_SF3a120	696..777	CDD:340498	29/80 (36%)
AT5G12280	NP_568261.1	Surp	174..220	CDD:460339	19/45 (42%)
		Ubl_SF3a120	345..417	CDD:340498	29/78 (37%)