Sequence 1: | NP_650583.1 | Gene: | Sf3a1 / 42048 | FlyBaseID: | FBgn0266917 | Length: | 784 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012816162.1 | Gene: | cherp / 496512 | XenbaseID: | XB-GENE-996440 | Length: | 955 | Species: | Xenopus tropicalis |
Alignment Length: | 922 | Identity: | 192/922 - (20%) |
---|---|---|---|
Similarity: | 290/922 - (31%) | Gaps: | 353/922 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 PP---EVRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNGGDPYHAYYRHKVNEFREGNDA 93
Fly 94 GITALASMKQLAVTSAAQQRQQ-------ELLKQVVEQQ---FVPKEPPPEFEF---IADPPSIS 145
Fly 146 ALDLDIVKLTAQFVARNGRQFLTNLMSREQRNFQFD-----FLRPQ-------HSLFQYFTKLLE 198
Fly 199 -------QYTKVLIP-----PKD---------------------LLGKLRSESAPGRSSMNQVLE 230
Fly 231 QVKYRANWQRHQEAQRRREEEKIERERVAYAQIDWHDFVVVETVDYQPFESGNFPPPTNPDEVGA 295
Fly 296 RVLMEERLMDEEG----DTEMQIESDDEGDSQANNLLDSGLKLSQMENRVGI----QMKNVSSYG 352
Fly 353 QP--TGPKRDNTQVQ-----DMDEASSDEDTPTTKLQPSVAPMLPPTHD-KVVVKKYDPKATQPK 409
Fly 410 QAPMPTDEYLISPITG--------EKIPASKVSEHMRIGLLDPRWVEQRDKHTVEKINQDNVFAA 466
Fly 467 GTAIEASLKQLAERRTDIFGVGDEETVIGKKLGEEETKKDDRVTWDGH---------TSSVEAAT 522
Fly 523 RAARANITLEEQIHQIHKVKGLLPDEEKEKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQHHQ- 586
Fly 587 --------------GGGGGHHGHHNPHH--HHPPHQQA--PPHQSHHHHPPQ--QPQPVMQLMQL 631
Fly 632 RPTMMQ-----------PP-----------FGAGGG----------GYMNMQ---PGGIPQQIAP 661
Fly 662 APPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSPVTIQVLVPNSDKSEWKLNGQMIAVTMALSE 726
Fly 727 PIANLKTKLQDE-------------TGMPPAKQKIFYEGMFF------KDSNTMAFYNLVNGTTV 772
Fly 773 HLQVKERGGRKK 784 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sf3a1 | NP_650583.1 | SWAP | 36..89 | CDD:197818 | 27/52 (52%) |
Surp | 150..200 | CDD:280053 | 13/68 (19%) | ||
PRP21_like_P | 227..479 | CDD:289034 | 53/275 (19%) | ||
SF3a120_C | 709..784 | CDD:176395 | 15/93 (16%) | ||
UBQ | 713..777 | CDD:214563 | 12/82 (15%) | ||
cherp | XP_012816162.1 | SWAP | 13..65 | CDD:197818 | 28/77 (36%) |
CTD_bind | 218..280 | CDD:368137 | 16/81 (20%) | ||
PAT1 | <530..>655 | CDD:370676 | 32/135 (24%) | ||
G-patch | 856..901 | CDD:366717 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1256232at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |