Sequence 1: | NP_650583.1 | Gene: | Sf3a1 / 42048 | FlyBaseID: | FBgn0266917 | Length: | 784 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014589.1 | Gene: | scaf6 / 3346235 | FlyBaseID: | FBgn0261872 | Length: | 960 | Species: | Drosophila melanogaster |
Alignment Length: | 843 | Identity: | 170/843 - (20%) |
---|---|---|---|
Similarity: | 262/843 - (31%) | Gaps: | 341/843 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 IYPPPE--VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNGGDPYHAYYRHKVNEFREGN 91
Fly 92 DAGITALASMKQLAVTSAAQQRQQELLK-QVVEQQFVP--------KEPPPEFEFIADPPSISAL 147
Fly 148 DLDIVKLTAQFVARNGRQFLTNLMSREQRNFQFDFLRPQHSLFQYFTKLLEQYTKVLIPPKDLLG 212
Fly 213 KLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREEEKIERERVAYAQIDWHDFVVVETVDYQ 277
Fly 278 PFESGNFPPPTNPDEVGARVLMEERLMDEEGDTEMQIESDDEGDSQANNLLD--SGLKLSQMENR 340
Fly 341 VGIQMKNVSSYGQPTGPKRDNT-QVQDMDEASSDEDTPTTKLQPSVAPMLPPTHDKVVVKKYDPK 404
Fly 405 ATQPKQAPMPTDEYLISPITGEKIPASK--VSEH--------------MRIGLLDPRWVEQRDKH 453
Fly 454 TVEKINQ-----------------DNV----FAAGTAIE--------ASLKQLAERRTDIFGVGD 489
Fly 490 EETVIGK----KLGEEETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQIHKVKGLLPDEEK 550
Fly 551 EKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQH--------HQGGGGGHHGHHNPHHHHPPHQQ 607
Fly 608 APPHQSHHHHP-----PQQPQPVMQLMQLR------PTMMQPPFGAGGG---------GYMNMQP 652
Fly 653 GGIPQQIAPA----PPVDI------------ME-----EEPPSK---KIRSEDNLIPEADFIATH 693
Fly 694 KSPVTI-----QVLVP---NSDKSEWKLNGQMIAVTMALSEPIANLKTKLQD---ETGMPPAK 745 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sf3a1 | NP_650583.1 | SWAP | 36..89 | CDD:197818 | 29/52 (56%) |
Surp | 150..200 | CDD:280053 | 0/49 (0%) | ||
PRP21_like_P | 227..479 | CDD:289034 | 48/299 (16%) | ||
SF3a120_C | 709..784 | CDD:176395 | 12/40 (30%) | ||
UBQ | 713..777 | CDD:214563 | 10/36 (28%) | ||
scaf6 | NP_001014589.1 | Surp | 13..61 | CDD:280053 | 28/72 (39%) |
CTD_bind | 271..329 | CDD:282648 | 10/57 (18%) | ||
G-patch | 885..933 | CDD:279867 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0007 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1256232at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |