Protein Alignment Sf3a1 and sap114

DIOPT Version :10

• Sequence 1: NP_650583.1
• Gene: Sf3a1 / 42048
• FlyBaseID: FBgn0266917
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_593239.1
• Gene: sap114 / 2541437
• PomBaseID: SPAC22A12.09C
• Length: 481
• Species: Schizosaccharomyces pombe
• Alignment Length: 539
• Identity: 182/539 - (33%)
• Similarity: 283/539 - (52%)
• Gaps: 95/539 - (17%)

  Fly     3 TLDAEANEEQFGNDQPKSMSGPIIGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNELGNPKF 67
            |.:.|...::...||..|:..   |:|.|||.:|.|:||:||:||||||.||.:|||||..|.||
pombe    12 TTNNETEHQKSITDQSSSVPA---GVILPPPAIREIIDKSASYVARNGPAFEEKIRQNEQANTKF 73

  Fly    68 NFLNGGDPYHAYYRHKVNEFREGN-DAGITALASMKQLAVTSAAQQRQQELLKQVVEQQFVPKEP 131
            .||:..||||.||:||:.|.|||. .:..|.|::.|    ||...:..|:.::..:        |
pombe    74 AFLHANDPYHPYYQHKLTEAREGKLKSHATGLSTQK----TSTLARPIQKPIEATI--------P 126

  Fly   132 PPEFEFIADP-PSISALDLDIVKLTAQFVARNGRQFLTNLMSREQRNFQFDFLRPQHSLFQYFTK 195
            .|.....::| ||||:||||:::|||::.|..|..||.:|..:|..|.|||||:|.::|:.||.:
pombe   127 APSPYLFSEPLPSISSLDLDVLRLTARYAAVRGSSFLVSLSQKEWNNTQFDFLKPNNALYPYFMR 191

  Fly   196 LLEQYTKVL-----IPPKDLLGKLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREEEKIER 255
            :::|||.::     .|.::|...:|...:        :|.:::.|..||.|.|:|:::::|:.|:
pombe   192 IVQQYTSLIREPISSPEQELRENVRDPYS--------LLSKIQPRVRWQSHMESQKKKQKEEAEK 248

  Fly   256 ERVAYAQIDWHDFVVVETVDY-QPFESGNFPPPTNPDEVGARVLMEERLMDEEGDTEMQIESDDE 319
            |::.||||||:||||||.:.: :..|......|||..::....|.::..|....|....||
pombe   249 EKLEYAQIDWNDFVVVEVIQFTKSDEHAKLAKPTNLADLQTATLEQKSAMFTMPDQNYTIE---- 309

  Fly   320 GDSQANNLLDSGLKLSQMENRVGIQMKNVSSYGQP-TGPKRDNTQVQDMDEASSDED---TPTTK 380
                                    :....:...:| :.||:....|......:|.|.   :.||.
pombe   310 ------------------------EAPPTAEPWEPISAPKKQEFGVSLPPSLASPEKGGISSTTS 350

  Fly   381 LQPS--VAPMLPPTHDKVVVKKYDPKATQPKQAPMPTDEYLISPITGEKIPASKVSEHMRIGLLD 443
            :.|:  .:|:|..| .:..|:|..|||.||| .||.     |||.:||.:||:::.||||:.|||
pombe   351 VSPAAQASPVLSTT-TQPKVQKPVPKAFQPK-VPME-----ISPFSGELVPATELEEHMRLKLLD 408

  Fly   444 PRWVEQRDKHTVEK--INQDNVFAAGTAIEASLKQLAERRTDIFGVGDEETVIGKKLGEEETKKD 506
            |||.|||......|  :|.:||..|     |::|:|..:|||:|.|.:     |.::.:||.::.
pombe   409 PRWQEQRKVEESRKSTLNLENVNVA-----ANMKRLVSQRTDLFDVQN-----GVEISQEEIERR 463

  Fly   507 DRVTWDGHTSSVEAATRAA 525
            .|           |||::|
pombe   464 KR-----------AATQSA 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sf3a1	NP_650583.1	SWAP	36..89	CDD:197818	33/52 (63%)
		Surp	150..200	CDD:460339	20/49 (41%)
		PRP21_like_P	228..480	CDD:403444	81/260 (31%)
		Ubl_SF3a120	696..777	CDD:340498
sap114	NP_593239.1	SWAP	42..95	CDD:197818	33/52 (63%)
		SWAP	145..197	CDD:197818	22/51 (43%)
		PRP21_like_P	214..442	CDD:403444	82/275 (30%)