Sequence 1: | NP_650583.1 | Gene: | Sf3a1 / 42048 | FlyBaseID: | FBgn0266917 | Length: | 784 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_506386.1 | Gene: | tag-65 / 179857 | WormBaseID: | WBGene00006442 | Length: | 675 | Species: | Caenorhabditis elegans |
Alignment Length: | 656 | Identity: | 120/656 - (18%) |
---|---|---|---|
Similarity: | 219/656 - (33%) | Gaps: | 229/656 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 127 VPKE-PPPEFEFI---ADPPSISALDLDIVKLTAQFV--------ARNG---------------- 163
Fly 164 ------RQFLTNLMSREQRNFQFDFL-RPQHS----------LFQYFTKLLEQYTKVLIPPKDLL 211
Fly 212 GKLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREEEKIER------ERVAYAQIDWHDFVV 270
Fly 271 VETVDYQPFESGNFPPPTNPDEVGARVLMEERLMDE-EG-------------DTEMQIESDDEGD 321
Fly 322 SQANNLLDSGLKLSQMENRVGIQMKNVSSYGQPTGPKRDNTQVQDMDE---------ASSDEDTP 377
Fly 378 TTKLQPSVAPMLPPTHDKVVVKKYDPKATQPKQAP----------------------MPTDEYLI 420
Fly 421 SPITGEK----IPASKVSEHMRIGL-----LDPRWVEQRDK--HTVEKINQDNVFAAGTAIEASL 474
Fly 475 KQ--LAERRTDIFGVGD--EETVIGKKLGEEETKKDDRVTWDGHTSSVE-------AATRAARAN 528
Fly 529 ITL----EEQIHQIHKV-----------KGLLPDEEKEKIGPK--PVGNKATLSAPPQPSTKSQH 576
Fly 577 SHSSQSQHHQGGGGGHHGHHNPHHHHPPHQQAPPHQSHHHHPPQQPQPVMQLMQLRPTMMQPPFG 641
Fly 642 AGGGGY 647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sf3a1 | NP_650583.1 | SWAP | 36..89 | CDD:197818 | |
Surp | 150..200 | CDD:280053 | 14/90 (16%) | ||
PRP21_like_P | 227..479 | CDD:289034 | 49/315 (16%) | ||
SF3a120_C | 709..784 | CDD:176395 | |||
UBQ | 713..777 | CDD:214563 | |||
tag-65 | NP_506386.1 | CTD_bind | 165..226 | CDD:282648 | 16/90 (18%) |
G_patch | 602..649 | CDD:197727 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1256232at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |