DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3534 and rhaB

DIOPT Version :9

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_418340.1 Gene:rhaB / 948399 ECOCYCID:EG11868 Length:489 Species:Escherichia coli


Alignment Length:501 Identity:97/501 - (19%)
Similarity:161/501 - (32%) Gaps:134/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQI-----------------DDSAFVVNRTPIWMD 141
            :|...|:|.:.|....:.:...|...|.....|                 |.....|.....:.|
E. coli    40 NGLHSQNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRD 104

  Fly   142 ATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEEANRISLVSSFISSLF 206
            :.|.....:.:..: ||.::.:.:|.:.....|..|:|.:.:|:...........|:..:.|...
E. coli   105 SRTNGLMAQAQQQL-GKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRL 168

  Fly   207 LGSVAPIDFSDGSGMNLLDIRKKNW------SKECLNVCAPDLDKRL-----------DIPVSPN 254
            .|                   |.||      :.:.:|:.:.|.|:.|           ..|..|.
E. coli   169 TG-------------------KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPG 214

  Fly   255 SIL-------GNVSPYFVERFSFSPDCKVAASTGDNPSA-LSGMLVGSSWLTISMGTSDTLMMSL 311
            :::       ||..|.            ||.::.|..|| ::..|.||....:|.||...:....
E. coli   215 NVIGHWICPQGNEIPV------------VAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFES 267

  Fly   312 KEPLN---------WEEGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDST 367
            :.|..         ..||.........:..|||...:.. |..:::|      |.........:.
E. coli   268 QTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRV-LQEQQIN------DLPALISATQAL 325

  Fly   368 PRGNFGNMAVHFNDMEII------PKAQGILRWNREMDPSSPDAARGVIKFSSPQIEIRALVEGQ 426
            |...|   .::.||...|      .:.|...|...:..|.| ||......|.|     .||:...
E. coli   326 PACRF---IINPNDDRFINPETMCSEIQAACRETAQPIPES-DAELARCIFDS-----LALLYAD 381

  Fly   427 MLHHRAVAEDLGYKFGPETQILVTGGASVNKSILQTIAD-----VFNAPVHIQDEGFEAALLGAA 486
            :||.  :|:..|..|   :|:.:.||...|..:.|..||     |...||       ||:.||..
E. coli   382 VLHE--LAQLRGEDF---SQLHIVGGGCQNTLLNQLCADACGIRVIAGPV-------EASTLGNI 434

  Fly   487 YRSAYALYLQEAGDGVTPLCYRDY--ILSLTSNKLSLVCEPHKDSE 530
              ....:.|.|..:      ..|:  ::|.|:|..:..  |:.|||
E. coli   435 --GIQLMTLDELNN------VDDFRQVVSTTANLTTFT--PNPDSE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 87/458 (19%)
PLN02669 11..546 CDD:178274 97/501 (19%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 23/91 (25%)
rhaBNP_418340.1 rhaB 19..489 CDD:182609 97/501 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1070
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10196
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
32.910

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