DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3534 and rhaB

DIOPT Version :10

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_418340.1 Gene:rhaB / 948399 ECOCYCID:EG11868 Length:489 Species:Escherichia coli


Alignment Length:500 Identity:98/500 - (19%)
Similarity:160/500 - (32%) Gaps:132/500 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQI-----------------DDSAFVVNRTPIWMD 141
            :|...|:|.:.|....:.:...|...|.....|                 |.....|.....:.|
E. coli    40 NGLHSQNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRD 104

  Fly   142 ATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEEANRISLVSSFISSLF 206
            :.|.....:.:..: ||.::.:.:|.:.....|..|:|.:.:|:...........|:..:.|...
E. coli   105 SRTNGLMAQAQQQL-GKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRL 168

  Fly   207 LGSVAPIDFSDGSGMNLLDIRKKNW------SKECLNVCAPDLDKRL-----------DIPVSPN 254
            .|                   |.||      :.:.:|:.:.|.|:.|           ..|..|.
E. coli   169 TG-------------------KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPG 214

  Fly   255 SIL-------GNVSPYFVERFSFSPDCKVAASTGDNPSA-LSGMLVGSSWLTISMGTSDTLMMSL 311
            :::       ||..|.            ||.::.|..|| ::..|.||....:|.||...:....
E. coli   215 NVIGHWICPQGNEIPV------------VAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFES 267

  Fly   312 KEPLN---------WEEGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDST 367
            :.|..         ..||.........:..|||...:.. |..:::|      |.........:.
E. coli   268 QTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRV-LQEQQIN------DLPALISATQAL 325

  Fly   368 PRGNFGNMAVHFNDMEII------PKAQGILRWNREMDPSSPDAARGVIKFSSPQIEIRALVEGQ 426
            |...|   .::.||...|      .:.|...|...:..|.| ||......|.|     .||:...
E. coli   326 PACRF---IINPNDDRFINPETMCSEIQAACRETAQPIPES-DAELARCIFDS-----LALLYAD 381

  Fly   427 MLHHRAVAEDLGYKFGPETQILVTGGASVNKSILQTIAD-----VFNAPVHIQDEGFEAALLGAA 486
            :||.  :|:..|..|   :|:.:.||...|..:.|..||     |...||       ||:.||..
E. coli   382 VLHE--LAQLRGEDF---SQLHIVGGGCQNTLLNQLCADACGIRVIAGPV-------EASTLGNI 434

  Fly   487 YRSAYAL-YLQEAGDGVTPLCYRDYILSLTSNKLSLVCEPHKDSE 530
            ......| .|....|      :|. ::|.|:|..:..  |:.|||
E. coli   435 GIQLMTLDELNNVDD------FRQ-VVSTTANLTTFT--PNPDSE 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 ASKHA_NBD_FGGY_SpXK-like 11..539 CDD:466795 97/499 (19%)
rhaBNP_418340.1 rhaB 19..489 CDD:182609 97/499 (19%)

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