DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and AT4G30310

DIOPT Version :9

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_194760.2 Gene:AT4G30310 / 829154 AraportID:AT4G30310 Length:579 Species:Arabidopsis thaliana


Alignment Length:643 Identity:138/643 - (21%)
Similarity:208/643 - (32%) Gaps:185/643 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PKQLKRTFLGFDLSTQKLKAVLLGSSLEVVAAA----EVKFDTDLPEFRTTG--GANAGSIKNEY 62
            |...:..|||.|:.|...:|.|...:.:::.:|    ::..|.|..|..:|.  .|...::|:..
plant     8 PFPSRSVFLGVDVGTGSARAGLFDDNGKLLGSATSPIQIWKDGDCIEQSSTDIWHAVCAAVKSAC 72

  Fly    63 FVQPVMWVKAMDI---VLDRLVMQQADLSTVAAISGSGQQHGSLYWSKHGINTLQNLDSEKFLHA 124
            .:..|..|:...|   ....||...|:.|.| .:|.||....::.                    
plant    73 SLANVSDVEVKGIGFAATCSLVAVDAEGSPV-TVSWSGDSRRNII-------------------- 116

  Fly   125 QIDDSAFVVNRTPIWMDATTTKQCLE--------MEMAVGG-------------KLNMVELTGSK 168
                         :|||....||...        ::...||             |.|:.| :.|.
plant   117 -------------VWMDHRAVKQAERINSFNSPVLQYCGGGVSPEMEPPKLLWVKENLKE-SWSM 167

  Fly   169 CYE----------RFTGPQIRKIYQQRC------HAY-----EEANR----ISLVSSFISSLFLG 208
            .|:          |.||...|.:....|      ||:     |:|:|    ......|...:.||
plant   168 VYKWMDLSDWLSYRATGDDTRSLCTTVCKWTYLGHAHMHQMTEKASRDMEACGWDDEFWEEIGLG 232

  Fly   209 ------------SVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPDLDKRLDIPVSPNSILGNVS 261
                        |||......|:|:..              ..|.:|......||..:.|..:..
plant   233 DLVDGHHAKIGRSVAFPGHPLGNGLTA--------------TAAKELGLLAGTPVGTSLIDAHAG 283

  Fly   262 PYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTISMGTSDTLMM---------SLKEPLNW 317
            ...|.......|.....|..|...:...::.|:|  |..|..|...:.         |...|..|
plant   284 GVGVMESKLESDSLTKESDVDTLCSRMVLVCGTS--TCHMAVSREKLFIPGVWGPFWSAMVPEYW 346

  Fly   318 -------EEGHILCHPTETEEFMGLLCFRNAS---LVREEMNK--KTTGGDWDKFNEYLDSTPRG 370
                   ..|.:|.|..|.......|..|.||   .|.|.:|.  ||...|        .|:|  
plant   347 LTEGGQSATGALLDHIIENHVASPRLANRAASQKVSVFELLNNILKTMAED--------TSSP-- 401

  Fly   371 NFGNMAVHFNDMEIIPKAQGILRWNRE--MDPSSPDAARGV-IKFSSPQIEI--RALVEGQMLHH 430
               .::...:||.|:|...|    ||.  .||:|.....|: :..|..|:.:  .|.::|.....
plant   402 ---FISALTSDMHILPDFHG----NRSPVADPNSKGVIFGMSLDTSEKQLALLYLATIQGIAYGT 459

  Fly   431 RAVAEDL---GYKFGPETQILVTGGASVNKSILQTIADVFNAPVHIQDEGFEAALLGAAYRSAYA 492
            |.:.|..   |:|.   ..:|..||.|.|...:|..||:...|:.:..|. |:.|||||...|. 
plant   460 RHIVEHCNTHGHKI---DTLLACGGLSKNPLFIQEHADIVGCPIILPRES-ESVLLGAAILGAV- 519

  Fly   493 LYLQEAGDGVTPLCYRDYILSLTSNKLSLVCEPHKDSEEIYAPMLQRYREMA-RVLSN 549
                 ||.....|  .|.:.:|  |....|..|..|      |.:::|.:.. |:..|
plant   520 -----AGKNYPSL--HDAMKAL--NAAGQVVHPSSD------PKIKKYHDAKYRIFRN 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 123/576 (21%)
PLN02669 11..546 CDD:178274 135/631 (21%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 28/98 (29%)
AT4G30310NP_194760.2 FGGY_YpCarbK_like 15..571 CDD:212663 137/636 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.