DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and Shpk

DIOPT Version :9

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_083307.1 Gene:Shpk / 74637 MGIID:1921887 Length:476 Species:Mus musculus


Alignment Length:538 Identity:115/538 - (21%)
Similarity:186/538 - (34%) Gaps:146/538 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTTGGANAGSIKNEYFVQPVMWVKAMDIV 76
            ||.||.|..:||.||.::..:.:...|...........|..|.||....|..|..:  ::|::..
Mouse     8 LGIDLGTTSVKAALLEAAPSLPSGFVVLASCARAARAETESAVAGPQGREQDVTRI--IQALNEC 70

  Fly    77 LDRLVMQQADLSTVAAISGSGQQHGSLYW-SKHGINTLQNLDSEKFLHAQIDDSAFV-----VNR 135
            ||.|..||  |..|..|..|||.||.|:| :..|...::.            ..|||     |:.
Mouse    71 LDALPRQQ--LQRVRGIGVSGQMHGILFWKAGQGCEWMEG------------GPAFVFEPRAVSH 121

  Fly   136 TPIWMDATTTKQCLEMEMAVGGKLNMVELTGSKCYERF----TGPQIRKIYQQRCHAYEEANRIS 196
            ...|.|.......|.........|::.  ||..|...|    ..|:..|       :|:.|..| 
Mouse   122 LVTWQDGRCNSSFLASLPKPDSHLSVA--TGFGCATIFWLLKNSPEFLK-------SYDAAGTI- 176

  Fly   197 LVSSFISSLFLGSVAPIDFSD--GSGMNLLDIRKKNWSKECLNVCA------PDLDKRLDIPVSP 253
              ..::.::..|...|: .||  .:.....:.:.::|:.:.|....      ||:       ..|
Mouse   177 --QDYVVAMLCGLPRPL-MSDQNAASWGYFNTQSQSWNLDTLEKAGFPIHLLPDI-------AEP 231

  Fly   254 NSILGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTISMGTSDTLMMSLKEPLNWE 318
            .|:.|..|..:   |......:|..:.||..:::...:...:...:::.||..|..|:  |:.::
Mouse   232 GSMAGRTSHTW---FEIPKGTQVGIALGDLQASVYSCMGQRTDAVLNISTSVQLAASM--PVGFQ 291

  Fly   319 EGHILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDSTPRG-----NFGNMAVH 378
                   |.:|.:        .|:.|              .|..|.|.|..|     |.||:...
Mouse   292 -------PLQTPD--------PAAPV--------------AFFPYFDRTYLGVAASLNGGNVLAT 327

  Fly   379 FNDMEIIPKAQGILRW----NREMDPSS-----------------------------PDAARGVI 410
            |..|        :::|    ..|::.|:                             ||....|.
Mouse   328 FVHM--------LVQWMADLGLEVEESTVYSRMIQAAAQQKDTHLTITPTVLGERHLPDQLASVT 384

  Fly   411 KFSSPQIEI----RALVEG--QMLHHRAVAEDLGYKFGPETQILVTGGA-SVNKSILQTIADVFN 468
            :.||..:.:    |||..|  |.||.....:.|  |.....:::.:|.| |.|:.:.|.:...|.
Mouse   385 RISSSDLSLGHVTRALCRGIVQNLHSMLPFQQL--KEWGVARVVGSGSALSRNEVLKQEVQRAFP 447

  Fly   469 APV---HIQDEGFEAALL 483
            .||   ...|..|.|||:
Mouse   448 FPVCFGQDVDAAFGAALV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 115/538 (21%)
PLN02669 11..546 CDD:178274 115/538 (21%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 13/41 (32%)
ShpkNP_083307.1 FGGY_SHK_like 5..466 CDD:212661 115/538 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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