DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and Gk5

DIOPT Version :9

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_008764796.1 Gene:Gk5 / 367146 RGDID:1311223 Length:534 Species:Rattus norvegicus


Alignment Length:560 Identity:118/560 - (21%)
Similarity:197/560 - (35%) Gaps:161/560 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPKQLKRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTTGGANAGSIKNEYFVQP- 66
            |.....|..||.|:.:..::..:...:..|                  .|::|..::|.| .|| 
  Rat    18 PTSSPSRFVLGLDVGSTVIRCHVYDRTARV------------------RGSSAQKVENVY-PQPG 63

  Fly    67 -------VMWVKAMDIVLDRLVMQQADLSTVAAISGSGQQHGSLYWSK------HGINTLQNLDS 118
                   .:|.:.:.::.|.:......::.:..:..|.|:...:.|:|      |...:.|:|.:
  Rat    64 WVEIDPDALWAQFVAVIKDAVKAAGVQMNQIVGLGISTQRATFITWNKKTGHHFHNFISWQDLRA 128

  Fly   119 EKFLHAQIDDSAFVVNRTPIWMDATTTKQCLEMEMAVGG-KL------NMVELTGSKCYERFTG- 175
            .:.:.:              |.::      |.|::..|. ||      |.|.||.|    |||. 
  Rat   129 AELVKS--------------WNNS------LIMKLLHGATKLLHFFSRNKVMLTVS----RFTFT 169

  Fly   176 ---------------PQIRKIYQQRCHAYEEANRI--SLVSSFISSLFLGSVAPIDFSDGSGMNL 223
                           |:::|       |.||.|..  ::.:..:..|..||....|:|:.|....
  Rat   170 TQHVTLRLVWILQNLPEVKK-------AVEEDNCCFGTIDTWLLYKLTKGSSYATDYSNASTTGF 227

  Fly   224 LDIRKKNWSKECLNVCAPDLDKRLDIPVSPNSILGNVSPYF--VERFSFSPDCKVAASTGDNPSA 286
            .|.....|||....:        :.||.|....:.:.|..|  |:...|.....|.|..||..||
  Rat   228 FDPYAMRWSKLIATM--------VSIPFSILPPVRDTSYNFGSVDEEIFGVPIPVVALVGDQQSA 284

  Fly   287 LSG---MLVGSSWLTISMGTSDTLMMSL-KEP----------LNWEEGHILCHPTETEEFMGLLC 337
            :.|   ...|...||  |||...|.::. |.|          :.|:.||            .|:|
  Rat   285 MFGECCFETGDVKLT--MGTGTFLDINTGKTPQHVNGGFYPLIGWKIGH------------ELVC 335

  Fly   338 FRNASLVREEMNKKTTGGD--W-DKFNEYLDSTPRGNFGNMAVHFNDME---IIPKAQGI---LR 393
            .       .|.|...||..  | .|.:.:.|:   .....||:...|.|   .:|...|:   |.
  Rat   336 L-------AEGNAGDTGTAIVWAQKLDLFTDA---AETEKMALSLEDSEGVYFVPSFSGLQAPLN 390

  Fly   394 WNREMDPSSPDAARGVIKFSSPQIEIRALVEGQMLHHRAVAEDLGYKFG-PETQILVTGGASVNK 457
                 ||.:..:..|:...:|....:||::|.....::.:.:.|..:.. |.|.|...||...|.
  Rat   391 -----DPCACASFMGLKHSTSKYHLVRAILESIAFRNKQLYDMLQREIQIPVTNIRADGGVCNNA 450

  Fly   458 SILQTIADVFN----APVHIQDEGFEAALLGAAYRSAYAL 493
            .::|..:|:.|    .|.|     |:.:.||||..:..|:
  Rat   451 FVMQMTSDLINEKIDRPAH-----FDMSCLGAASLAGLAV 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 115/549 (21%)
PLN02669 11..546 CDD:178274 116/552 (21%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 15/51 (29%)
Gk5XP_008764796.1 GlpK 23..530 CDD:223628 117/555 (21%)
FGGY_GK5_metazoa 25..527 CDD:212665 116/553 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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