DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and Xylb

DIOPT Version :9

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001028381.1 Gene:Xylb / 102448 MGIID:2142985 Length:551 Species:Mus musculus


Alignment Length:554 Identity:243/554 - (43%)
Similarity:351/554 - (63%) Gaps:27/554 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GPPKQL-----KRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTTGGANAGSIKNE 61
            |.|:.|     :|..||:|.|||::|.|.:.:.|.|.....|.||.|||||.|.||.:....:..
Mouse    11 GTPRALAERAGRRCCLGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVHKDRLT 75

  Fly    62 YFVQPVMWVKAMDIVLDRLVMQQADLSTVAAISGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQI 126
            .....:|||:|:|::|.::.....|.|.|.|:||:||||||:||.......|.:|.....||.|:
Mouse    76 VTSPVLMWVQALDLILGKMKSSGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALPLHQQL 140

  Fly   127 DDSAFVVNRTPIWMDATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEE 191
             .|.|.::..|||||::||.||.::|.||||...:..||||:.||||||.||.|::|:...||..
Mouse   141 -QSCFSISDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQIAKLFQKNPEAYSH 204

  Fly   192 ANRISLVSSFISSLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPDLDKRLDIPVSPNSI 256
            :.||||||||.:|||||..:|||:|||||||||.|::|.||:.||:||||.|:::|..||...|:
Mouse   205 SERISLVSSFAASLFLGGYSPIDYSDGSGMNLLQIQEKVWSQACLDVCAPHLEEKLGSPVPSCSV 269

  Fly   257 LGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTISMGTSDTLMMSLKEPLNWEEGH 321
            :|.:|.|:|:|:.|.|.|||.|.:||||::|:||.:....:.:|:||||||.:.|::|:...|||
Mouse   270 VGTISSYYVQRYGFPPGCKVVAFSGDNPASLAGMRLEEGDIAVSLGTSDTLFLWLQKPMPALEGH 334

  Fly   322 ILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDSTPRGNFGNMAVHFNDMEIIP 386
            |.|:|.:.:.:|.||||:|.||:||::..::....|:||::.|.||..||.||:..:|:.|||.|
Mouse   335 IFCNPVDPQHYMALLCFKNGSLMREKIRDESASCSWNKFSKALKSTAMGNNGNLGFYFDVMEITP 399

  Fly   387 KAQGILRWNRE-MDPSSPDAARGVIKFSSPQIEIRALVEGQMLHHRAVAEDLGYKFGPETQILVT 450
            :..|..|:|.| |:.|:         |.. .:|||||:|||.:..|..||.|||:..|:|:||.|
Mouse   400 EIIGRHRFNAENMEVSA---------FPG-DVEIRALIEGQFMAKRIHAEGLGYRVMPKTKILAT 454

  Fly   451 GGASVNKSILQTIADVFNAPVHIQDEGFEAALLGAAYRSAYALYLQEAGDGVTPLCYRDYILSLT 515
            ||||.||.|||.:||||.|||::.|. ..:|.:|:|||:.:.|      .|.|.:.:.:.:.|  
Mouse   455 GGASHNKDILQVLADVFGAPVYVIDT-TSSACVGSAYRAFHGL------AGGTGVAFSEVVKS-- 510

  Fly   516 SNKLSLVCEPHKDSEEIYAPMLQRYREM-ARVLS 548
            :.:.||...|:..:.::||.:|.||..: .|:||
Mouse   511 APQPSLAATPNPGASQVYAALLPRYSALEQRILS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 224/481 (47%)
PLN02669 11..546 CDD:178274 236/536 (44%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 37/98 (38%)
XylbNP_001028381.1 FGGY_D-XK_euk 24..494 CDD:212660 224/481 (47%)
PLN02669 26..549 CDD:178274 239/539 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833646
Domainoid 1 1.000 185 1.000 Domainoid score I3382
eggNOG 1 0.900 - - E1_COG1070
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3746
Inparanoid 1 1.050 441 1.000 Inparanoid score I1643
Isobase 1 0.950 - 0 Normalized mean entropy S1469
OMA 1 1.010 - - QHG56396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004391
OrthoInspector 1 1.000 - - otm43432
orthoMCL 1 0.900 - - OOG6_104017
Panther 1 1.100 - - LDO PTHR10196
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1675
SonicParanoid 1 1.000 - - X3110
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.