DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3534 and Xylb

DIOPT Version :10

Sequence 1:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001028381.1 Gene:Xylb / 102448 MGIID:2142985 Length:551 Species:Mus musculus


Alignment Length:554 Identity:243/554 - (43%)
Similarity:351/554 - (63%) Gaps:27/554 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GPPKQL-----KRTFLGFDLSTQKLKAVLLGSSLEVVAAAEVKFDTDLPEFRTTGGANAGSIKNE 61
            |.|:.|     :|..||:|.|||::|.|.:.:.|.|.....|.||.|||||.|.||.:....:..
Mouse    11 GTPRALAERAGRRCCLGWDFSTQQVKVVAVDAELNVFYEDSVHFDRDLPEFGTQGGVHVHKDRLT 75

  Fly    62 YFVQPVMWVKAMDIVLDRLVMQQADLSTVAAISGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQI 126
            .....:|||:|:|::|.::.....|.|.|.|:||:||||||:||.......|.:|.....||.|:
Mouse    76 VTSPVLMWVQALDLILGKMKSSGFDFSQVLALSGAGQQHGSVYWKTGASLALSSLSPALPLHQQL 140

  Fly   127 DDSAFVVNRTPIWMDATTTKQCLEMEMAVGGKLNMVELTGSKCYERFTGPQIRKIYQQRCHAYEE 191
             .|.|.::..|||||::||.||.::|.||||...:..||||:.||||||.||.|::|:...||..
Mouse   141 -QSCFSISDCPIWMDSSTTAQCHQLEAAVGGAQALSCLTGSRAYERFTGNQIAKLFQKNPEAYSH 204

  Fly   192 ANRISLVSSFISSLFLGSVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAPDLDKRLDIPVSPNSI 256
            :.||||||||.:|||||..:|||:|||||||||.|::|.||:.||:||||.|:::|..||...|:
Mouse   205 SERISLVSSFAASLFLGGYSPIDYSDGSGMNLLQIQEKVWSQACLDVCAPHLEEKLGSPVPSCSV 269

  Fly   257 LGNVSPYFVERFSFSPDCKVAASTGDNPSALSGMLVGSSWLTISMGTSDTLMMSLKEPLNWEEGH 321
            :|.:|.|:|:|:.|.|.|||.|.:||||::|:||.:....:.:|:||||||.:.|::|:...|||
Mouse   270 VGTISSYYVQRYGFPPGCKVVAFSGDNPASLAGMRLEEGDIAVSLGTSDTLFLWLQKPMPALEGH 334

  Fly   322 ILCHPTETEEFMGLLCFRNASLVREEMNKKTTGGDWDKFNEYLDSTPRGNFGNMAVHFNDMEIIP 386
            |.|:|.:.:.:|.||||:|.||:||::..::....|:||::.|.||..||.||:..:|:.|||.|
Mouse   335 IFCNPVDPQHYMALLCFKNGSLMREKIRDESASCSWNKFSKALKSTAMGNNGNLGFYFDVMEITP 399

  Fly   387 KAQGILRWNRE-MDPSSPDAARGVIKFSSPQIEIRALVEGQMLHHRAVAEDLGYKFGPETQILVT 450
            :..|..|:|.| |:.|:         |.. .:|||||:|||.:..|..||.|||:..|:|:||.|
Mouse   400 EIIGRHRFNAENMEVSA---------FPG-DVEIRALIEGQFMAKRIHAEGLGYRVMPKTKILAT 454

  Fly   451 GGASVNKSILQTIADVFNAPVHIQDEGFEAALLGAAYRSAYALYLQEAGDGVTPLCYRDYILSLT 515
            ||||.||.|||.:||||.|||::.|. ..:|.:|:|||:.:.|      .|.|.:.:.:.:.|  
Mouse   455 GGASHNKDILQVLADVFGAPVYVIDT-TSSACVGSAYRAFHGL------AGGTGVAFSEVVKS-- 510

  Fly   516 SNKLSLVCEPHKDSEEIYAPMLQRYREM-ARVLS 548
            :.:.||...|:..:.::||.:|.||..: .|:||
Mouse   511 APQPSLAATPNPGASQVYAALLPRYSALEQRILS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3534NP_650582.1 ASKHA_NBD_FGGY_SpXK-like 11..539 CDD:466795 234/528 (44%)
XylbNP_001028381.1 ASKHA_NBD_FGGY_SpXK-like 24..534 CDD:466795 234/529 (44%)

Return to query results.
Submit another query.