DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC2A and AT3G04830

DIOPT Version :9

Sequence 1:NP_001262652.1 Gene:EMC2A / 42046 FlyBaseID:FBgn0038462 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_850995.1 Gene:AT3G04830 / 819643 AraportID:AT3G04830 Length:303 Species:Arabidopsis thaliana


Alignment Length:266 Identity:94/266 - (35%)
Similarity:148/266 - (55%) Gaps:12/266 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RHSEEVVQLWVAVLED--KVHKTGNERHLILEQVIIAALDTARFDIATKCTKQLSLEFPGSLRVM 88
            |.||.|::..:::|.|  |....|.:...:.|||.|||:|.....:|..|.|.|..:||.|.||.
plant    37 RRSEIVLKHGLSILNDSGKRSALGPDEWTLYEQVAIAAMDCQSLGVAQNCIKVLKKKFPESKRVG 101

  Fly    89 KFKAMRYEALEQYDEADEVLDAIIAKDETNAAPRKRKIAILKARGRRLEAIKELNEYLKKFMSDQ 153
            |.:|:..||...::||::...:::..:..:....|||:|:.||:|:...||:.||:||:.||:|.
plant   102 KLEALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKVAMAKAQGKSSLAIEHLNKYLEVFMADH 166

  Fly   154 EAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAEIRYTMGGVENMESARTYYSQALK 218
            :||.||..:|::...:.:||||.||::|..|...|.|...|::.||:||:||:.:||.||:..:.
plant   167 DAWRELAEIYVSLQMYKQAAFCYEELILTQPTLPLYHLAYADVLYTIGGLENLIAARKYYAATID 231

  Fly   219 L-NPHNLRALYGIYLCCN---HLDNSRAVSSK---RKELQKLSQWALEQLLTKQTIVPLE---AA 273
            | ...:.|||.||.||.:   .:...|....|   ..|||.|:..|||:...::....|.   :|
plant   232 LTGGKSTRALLGICLCGSAIAQISKGRNKEDKDMAAPELQSLAATALEREYKQKAPAKLNLLTSA 296

  Fly   274 FGNLEI 279
            ..||:|
plant   297 LRNLKI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC2ANP_001262652.1 TPR repeat 86..113 CDD:276809 8/26 (31%)
TPR_11 154..221 CDD:290150 27/67 (40%)
TPR repeat 154..181 CDD:276809 11/26 (42%)
TPR repeat 186..219 CDD:276809 13/32 (41%)
AT3G04830NP_850995.1 TPR repeat 102..126 CDD:276809 6/23 (26%)
TPR repeat 131..161 CDD:276809 13/29 (45%)
TPR repeat 166..193 CDD:276809 11/26 (42%)
TPR repeat 200..226 CDD:276809 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1416
eggNOG 1 0.900 - - E1_KOG3060
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8785
Inparanoid 1 1.050 150 1.000 Inparanoid score I1716
OMA 1 1.010 - - QHG55498
OrthoDB 1 1.010 - - D956854at2759
OrthoFinder 1 1.000 - - FOG0003504
OrthoInspector 1 1.000 - - mtm1182
orthoMCL 1 0.900 - - OOG6_102350
Panther 1 1.100 - - LDO PTHR12760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2876
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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