DRSC/TRiP Functional Genomics Resources

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Protein Alignment EMC2B and EMC2A

DIOPT Version :9

Sequence 1:NP_001262651.1 Gene:EMC2B / 42045 FlyBaseID:FBgn0038461 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001262652.1 Gene:EMC2A / 42046 FlyBaseID:FBgn0038462 Length:282 Species:Drosophila melanogaster


Alignment Length:282 Identity:281/282 - (99%)
Similarity:282/282 - (100%) Gaps:0/282 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNERHLILEQVIIAALDTA 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MSLDYEKMSWSDVRDQFRTWREETGRHSEEVVQLWVAVLEDKVHKTGNERHLILEQVIIAALDTA 65

  Fly    66 RFDIATKCTKQLALEFPGSLRVMKFKAMRYEALEQYDEADEVLDAIIAKDETNAAPRKRKIAILK 130
            ||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 RFDIATKCTKQLSLEFPGSLRVMKFKAMRYEALEQYDEADEVLDAIIAKDETNAAPRKRKIAILK 130

  Fly   131 ARGRRLEAIKELNEYLKKFMSDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAE 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 ARGRRLEAIKELNEYLKKFMSDQEAWHELCNMYLAEGEFGKAAFCMEEVLLHNPHSHLIHQRLAE 195

  Fly   196 IRYTMGGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKELQKLSQWALEQ 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 IRYTMGGVENMESARTYYSQALKLNPHNLRALYGIYLCCNHLDNSRAVSSKRKELQKLSQWALEQ 260

  Fly   261 LLTKQTIVPLEAAFGNLEIKSN 282
            ||||||||||||||||||||||
  Fly   261 LLTKQTIVPLEAAFGNLEIKSN 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EMC2BNP_001262651.1 TPR repeat 86..113 CDD:276809 26/26 (100%)
TPR_11 154..221 CDD:290150 66/66 (100%)
TPR repeat 154..181 CDD:276809 26/26 (100%)
TPR repeat 186..219 CDD:276809 32/32 (100%)
EMC2ANP_001262652.1 TPR repeat 86..113 CDD:276809 26/26 (100%)
TPR_11 154..221 CDD:290150 66/66 (100%)
TPR repeat 154..181 CDD:276809 26/26 (100%)
TPR repeat 186..219 CDD:276809 32/32 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473008
Domainoid 1 1.000 150 1.000 Domainoid score I1416
eggNOG 1 0.900 - - E1_KOG3060
Homologene 1 1.000 - - H8785
Inparanoid 1 1.050 150 1.000 Inparanoid score I1716
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D465703at33208
OrthoFinder 1 1.000 - - FOG0003504
OrthoInspector 1 1.000 - - otm26198
orthoMCL 1 0.900 - - OOG6_102350
Panther 1 1.100 - - P PTHR12760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2876
1211.800

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